Gene : Medtr8g088730 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10766//PTHR10766:SF52 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN Description:  endomembrane protein 70 family protein
Genomic Order:  4562 Name:  ? Medtr8g088730
Secondary Identifier:  ? PAC:31071872
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g088730 0.5kb upstream 0.5kb upstream 7151   true chr8: 36852563-36859713 Medicago truncatula
Medtr8g088730 0.5kb upstream 0.5kb upstream 500   false chr8: 36859214-36859713 Medicago truncatula
Medtr8g088730 0.5kb downstream 0.5kb downstream 7151   true chr8: 36852063-36859213 Medicago truncatula
Medtr8g088730 0.5kb downstream 0.5kb downstream 500   false chr8: 36852063-36852562 Medicago truncatula
Medtr8g088730 1.0kb upstream 1.0kb upstream 7651   true chr8: 36852563-36860213 Medicago truncatula
Medtr8g088730 1.0kb upstream 1.0kb upstream 1000   false chr8: 36859214-36860213 Medicago truncatula
Medtr8g088730 1.0kb downstream 1.0kb downstream 7651   true chr8: 36851563-36859213 Medicago truncatula
Medtr8g088730 1.0kb downstream 1.0kb downstream 1000   false chr8: 36851563-36852562 Medicago truncatula
Medtr8g088730 2.0kb upstream 2.0kb upstream 8651   true chr8: 36852563-36861213 Medicago truncatula
Medtr8g088730 2.0kb upstream 2.0kb upstream 2000   false chr8: 36859214-36861213 Medicago truncatula
Medtr8g088730 2.0kb downstream 2.0kb downstream 8651   true chr8: 36850563-36859213 Medicago truncatula
Medtr8g088730 2.0kb downstream 2.0kb downstream 2000   false chr8: 36850563-36852562 Medicago truncatula
Medtr8g088730 5.0kb upstream 5.0kb upstream 11651   true chr8: 36852563-36864213 Medicago truncatula
Medtr8g088730 5.0kb upstream 5.0kb upstream 5000   false chr8: 36859214-36864213 Medicago truncatula
Medtr8g088730 5.0kb downstream 5.0kb downstream 11651   true chr8: 36847563-36859213 Medicago truncatula
Medtr8g088730 5.0kb downstream 5.0kb downstream 5000   false chr8: 36847563-36852562 Medicago truncatula
Medtr8g088730 10.0kb upstream 10.0kb upstream 16651   true chr8: 36852563-36869213 Medicago truncatula
Medtr8g088730 10.0kb upstream 10.0kb upstream 10000   false chr8: 36859214-36869213 Medicago truncatula
Medtr8g088730 10.0kb downstream 10.0kb downstream 16651   true chr8: 36842563-36859213 Medicago truncatula
Medtr8g088730 10.0kb downstream 10.0kb downstream 10000   false chr8: 36842563-36852562 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311351 5265 Fabidae View MSA
124071508 5270 Rosid View MSA
123743269 5271 Pentapetalae View MSA
122792908 5272 Eudicot View MSA
122045723 5273 Angiosperm View MSA
121344967 5274 Embryophyte View MSA
123423887 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.437        
cufflinks 8.527        
cufflinks 7.425        
cufflinks 12.321     High  
cufflinks 10.147        
cufflinks 3.704       Low
cufflinks 11.603     High  
cufflinks 6.171        
cufflinks 13.556     High High

0 Strain