Gene : Medtr8g088600 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR30239 - ACETOLACTATE SYNTHASE III, REGULATORY SUBUNIT Description:  acetolactate synthase, small subunit
Genomic Order:  4552 Name:  ? Medtr8g088600
Secondary Identifier:  ? PAC:31069744
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula BRANCHED-CHAIN-AA-SYN-PWY Medicago truncatula pathologic  
Mtruncatula ILEUSYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3001 Medicago truncatula pathologic  
Mtruncatula VALSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g088600 0.5kb upstream 0.5kb upstream 9149   true chr8: 36766413-36775561 Medicago truncatula
Medtr8g088600 0.5kb upstream 0.5kb upstream 500   false chr8: 36766413-36766912 Medicago truncatula
Medtr8g088600 0.5kb downstream 0.5kb downstream 9149   true chr8: 36766913-36776061 Medicago truncatula
Medtr8g088600 0.5kb downstream 0.5kb downstream 500   false chr8: 36775562-36776061 Medicago truncatula
Medtr8g088600 1.0kb upstream 1.0kb upstream 9649   true chr8: 36765913-36775561 Medicago truncatula
Medtr8g088600 1.0kb upstream 1.0kb upstream 1000   false chr8: 36765913-36766912 Medicago truncatula
Medtr8g088600 1.0kb downstream 1.0kb downstream 9649   true chr8: 36766913-36776561 Medicago truncatula
Medtr8g088600 1.0kb downstream 1.0kb downstream 1000   false chr8: 36775562-36776561 Medicago truncatula
Medtr8g088600 2.0kb upstream 2.0kb upstream 10649   true chr8: 36764913-36775561 Medicago truncatula
Medtr8g088600 2.0kb upstream 2.0kb upstream 2000   false chr8: 36764913-36766912 Medicago truncatula
Medtr8g088600 2.0kb downstream 2.0kb downstream 10649   true chr8: 36766913-36777561 Medicago truncatula
Medtr8g088600 2.0kb downstream 2.0kb downstream 2000   false chr8: 36775562-36777561 Medicago truncatula
Medtr8g088600 5.0kb upstream 5.0kb upstream 13649   true chr8: 36761913-36775561 Medicago truncatula
Medtr8g088600 5.0kb upstream 5.0kb upstream 5000   false chr8: 36761913-36766912 Medicago truncatula
Medtr8g088600 5.0kb downstream 5.0kb downstream 13649   true chr8: 36766913-36780561 Medicago truncatula
Medtr8g088600 5.0kb downstream 5.0kb downstream 5000   false chr8: 36775562-36780561 Medicago truncatula
Medtr8g088600 10.0kb upstream 10.0kb upstream 18649   true chr8: 36756913-36775561 Medicago truncatula
Medtr8g088600 10.0kb upstream 10.0kb upstream 10000   false chr8: 36756913-36766912 Medicago truncatula
Medtr8g088600 10.0kb downstream 10.0kb downstream 18649   true chr8: 36766913-36785561 Medicago truncatula
Medtr8g088600 10.0kb downstream 10.0kb downstream 10000   false chr8: 36775562-36785561 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
122300213 5265 Fabidae View MSA
124071957 5270 Rosid View MSA
123740073 5271 Pentapetalae View MSA
122796860 5272 Eudicot View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.818       Low
cufflinks 5.069       High
cufflinks 3.591        
cufflinks 0.921        
cufflinks 5.863       High
cufflinks 0.701       Low
cufflinks 0.921        
cufflinks 4.993        
cufflinks 2.524        

0 Strain