Gene : Medtr8g089500 M. truncatula Mt4.0v1
Defline:  (1 of 10) PF05278 - Arabidopsis phospholipase-like protein (PEARLI 4) (PEARLI-4) Description:  plant phospholipase-like protein
Genomic Order:  4618 Name:  ? Medtr8g089500
Secondary Identifier:  ? PAC:31072230
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g089500 0.5kb upstream 0.5kb upstream 2399   true chr8: 37202286-37204684 Medicago truncatula
Medtr8g089500 0.5kb upstream 0.5kb upstream 500   false chr8: 37204185-37204684 Medicago truncatula
Medtr8g089500 0.5kb downstream 0.5kb downstream 2399   true chr8: 37201786-37204184 Medicago truncatula
Medtr8g089500 0.5kb downstream 0.5kb downstream 500   false chr8: 37201786-37202285 Medicago truncatula
Medtr8g089500 1.0kb upstream 1.0kb upstream 2899   true chr8: 37202286-37205184 Medicago truncatula
Medtr8g089500 1.0kb upstream 1.0kb upstream 1000   false chr8: 37204185-37205184 Medicago truncatula
Medtr8g089500 1.0kb downstream 1.0kb downstream 2899   true chr8: 37201286-37204184 Medicago truncatula
Medtr8g089500 1.0kb downstream 1.0kb downstream 1000   false chr8: 37201286-37202285 Medicago truncatula
Medtr8g089500 2.0kb upstream 2.0kb upstream 3899   true chr8: 37202286-37206184 Medicago truncatula
Medtr8g089500 2.0kb upstream 2.0kb upstream 2000   false chr8: 37204185-37206184 Medicago truncatula
Medtr8g089500 2.0kb downstream 2.0kb downstream 3899   true chr8: 37200286-37204184 Medicago truncatula
Medtr8g089500 2.0kb downstream 2.0kb downstream 2000   false chr8: 37200286-37202285 Medicago truncatula
Medtr8g089500 5.0kb upstream 5.0kb upstream 6899   true chr8: 37202286-37209184 Medicago truncatula
Medtr8g089500 5.0kb upstream 5.0kb upstream 5000   false chr8: 37204185-37209184 Medicago truncatula
Medtr8g089500 5.0kb downstream 5.0kb downstream 6899   true chr8: 37197286-37204184 Medicago truncatula
Medtr8g089500 5.0kb downstream 5.0kb downstream 5000   false chr8: 37197286-37202285 Medicago truncatula
Medtr8g089500 10.0kb upstream 10.0kb upstream 11899   true chr8: 37202286-37214184 Medicago truncatula
Medtr8g089500 10.0kb upstream 10.0kb upstream 10000   false chr8: 37204185-37214184 Medicago truncatula
Medtr8g089500 10.0kb downstream 10.0kb downstream 11899   true chr8: 37192286-37204184 Medicago truncatula
Medtr8g089500 10.0kb downstream 10.0kb downstream 10000   false chr8: 37192286-37202285 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121655566 5273 Angiosperm View MSA
122295867 5265 Fabidae View MSA
124035344 5270 Rosid View MSA
123608870 5271 Pentapetalae View MSA
122643522 5272 Eudicot View MSA
120927669 5274 Embryophyte View MSA
122968318 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.334        
cufflinks 0.413        
cufflinks 0.543       High
cufflinks 0.249       Low
cufflinks 0.624       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.263       Low
cufflinks 0.433        
cufflinks 0.345        

0 Strain