Gene : Medtr8g089320 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11785:SF230 - CATIONIC AMINO ACID TRANSPORTER 1 Description:  cationic amino acid transporter-like protein
Genomic Order:  4605 Name:  ? Medtr8g089320
Secondary Identifier:  ? PAC:31075365
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g089320 0.5kb upstream 0.5kb upstream 3731   true chr8: 37110613-37114343 Medicago truncatula
Medtr8g089320 0.5kb upstream 0.5kb upstream 500   false chr8: 37113844-37114343 Medicago truncatula
Medtr8g089320 0.5kb downstream 0.5kb downstream 3731   true chr8: 37110113-37113843 Medicago truncatula
Medtr8g089320 0.5kb downstream 0.5kb downstream 500   false chr8: 37110113-37110612 Medicago truncatula
Medtr8g089320 1.0kb upstream 1.0kb upstream 4231   true chr8: 37110613-37114843 Medicago truncatula
Medtr8g089320 1.0kb upstream 1.0kb upstream 1000   false chr8: 37113844-37114843 Medicago truncatula
Medtr8g089320 1.0kb downstream 1.0kb downstream 4231   true chr8: 37109613-37113843 Medicago truncatula
Medtr8g089320 1.0kb downstream 1.0kb downstream 1000   false chr8: 37109613-37110612 Medicago truncatula
Medtr8g089320 2.0kb upstream 2.0kb upstream 5231   true chr8: 37110613-37115843 Medicago truncatula
Medtr8g089320 2.0kb upstream 2.0kb upstream 2000   false chr8: 37113844-37115843 Medicago truncatula
Medtr8g089320 2.0kb downstream 2.0kb downstream 5231   true chr8: 37108613-37113843 Medicago truncatula
Medtr8g089320 2.0kb downstream 2.0kb downstream 2000   false chr8: 37108613-37110612 Medicago truncatula
Medtr8g089320 5.0kb upstream 5.0kb upstream 8231   true chr8: 37110613-37118843 Medicago truncatula
Medtr8g089320 5.0kb upstream 5.0kb upstream 5000   false chr8: 37113844-37118843 Medicago truncatula
Medtr8g089320 5.0kb downstream 5.0kb downstream 8231   true chr8: 37105613-37113843 Medicago truncatula
Medtr8g089320 5.0kb downstream 5.0kb downstream 5000   false chr8: 37105613-37110612 Medicago truncatula
Medtr8g089320 10.0kb upstream 10.0kb upstream 13231   true chr8: 37110613-37123843 Medicago truncatula
Medtr8g089320 10.0kb upstream 10.0kb upstream 10000   false chr8: 37113844-37123843 Medicago truncatula
Medtr8g089320 10.0kb downstream 10.0kb downstream 13231   true chr8: 37100613-37113843 Medicago truncatula
Medtr8g089320 10.0kb downstream 10.0kb downstream 10000   false chr8: 37100613-37110612 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300353 5265 Fabidae View MSA
124062541 5270 Rosid View MSA
123753183 5271 Pentapetalae View MSA
122795315 5272 Eudicot View MSA
122045421 5273 Angiosperm View MSA
121350184 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.099        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain