Gene : Medtr8g089310 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 Description:  LSD1-type zinc finger protein
Genomic Order:  4604 Name:  ? Medtr8g089310
Secondary Identifier:  ? PAC:31072850
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g089310 0.5kb upstream 0.5kb upstream 7553   true chr8: 37101705-37109257 Medicago truncatula
Medtr8g089310 0.5kb upstream 0.5kb upstream 500   false chr8: 37101705-37102204 Medicago truncatula
Medtr8g089310 0.5kb downstream 0.5kb downstream 7553   true chr8: 37102205-37109757 Medicago truncatula
Medtr8g089310 0.5kb downstream 0.5kb downstream 500   false chr8: 37109258-37109757 Medicago truncatula
Medtr8g089310 1.0kb upstream 1.0kb upstream 8053   true chr8: 37101205-37109257 Medicago truncatula
Medtr8g089310 1.0kb upstream 1.0kb upstream 1000   false chr8: 37101205-37102204 Medicago truncatula
Medtr8g089310 1.0kb downstream 1.0kb downstream 8053   true chr8: 37102205-37110257 Medicago truncatula
Medtr8g089310 1.0kb downstream 1.0kb downstream 1000   false chr8: 37109258-37110257 Medicago truncatula
Medtr8g089310 2.0kb upstream 2.0kb upstream 9053   true chr8: 37100205-37109257 Medicago truncatula
Medtr8g089310 2.0kb upstream 2.0kb upstream 2000   false chr8: 37100205-37102204 Medicago truncatula
Medtr8g089310 2.0kb downstream 2.0kb downstream 9053   true chr8: 37102205-37111257 Medicago truncatula
Medtr8g089310 2.0kb downstream 2.0kb downstream 2000   false chr8: 37109258-37111257 Medicago truncatula
Medtr8g089310 5.0kb upstream 5.0kb upstream 12053   true chr8: 37097205-37109257 Medicago truncatula
Medtr8g089310 5.0kb upstream 5.0kb upstream 5000   false chr8: 37097205-37102204 Medicago truncatula
Medtr8g089310 5.0kb downstream 5.0kb downstream 12053   true chr8: 37102205-37114257 Medicago truncatula
Medtr8g089310 5.0kb downstream 5.0kb downstream 5000   false chr8: 37109258-37114257 Medicago truncatula
Medtr8g089310 10.0kb upstream 10.0kb upstream 17053   true chr8: 37092205-37109257 Medicago truncatula
Medtr8g089310 10.0kb upstream 10.0kb upstream 10000   false chr8: 37092205-37102204 Medicago truncatula
Medtr8g089310 10.0kb downstream 10.0kb downstream 17053   true chr8: 37102205-37119257 Medicago truncatula
Medtr8g089310 10.0kb downstream 10.0kb downstream 10000   false chr8: 37109258-37119257 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304493 5265 Fabidae View MSA
124064125 5270 Rosid View MSA
123749218 5271 Pentapetalae View MSA
122793241 5272 Eudicot View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.776        
cufflinks 2.519       Low
cufflinks 4.376        
cufflinks 6.653       High
cufflinks 2.699       Low
cufflinks 4.974        
cufflinks 6.626       High
cufflinks 3.343        
cufflinks 6.45       High

0 Strain