Gene : Medtr8g089300 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11615//PTHR11615:SF120 - NITRATE, FROMATE, IRON DEHYDROGENASE Description:  CASP POPTRDRAFT-like protein
Genomic Order:  4603 Name:  ? Medtr8g089300
Secondary Identifier:  ? PAC:31069527
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g089300 0.5kb upstream 0.5kb upstream 1699   true chr8: 37099766-37101464 Medicago truncatula
Medtr8g089300 0.5kb upstream 0.5kb upstream 500   false chr8: 37100965-37101464 Medicago truncatula
Medtr8g089300 0.5kb downstream 0.5kb downstream 1699   true chr8: 37099266-37100964 Medicago truncatula
Medtr8g089300 0.5kb downstream 0.5kb downstream 500   false chr8: 37099266-37099765 Medicago truncatula
Medtr8g089300 1.0kb upstream 1.0kb upstream 2199   true chr8: 37099766-37101964 Medicago truncatula
Medtr8g089300 1.0kb upstream 1.0kb upstream 1000   false chr8: 37100965-37101964 Medicago truncatula
Medtr8g089300 1.0kb downstream 1.0kb downstream 2199   true chr8: 37098766-37100964 Medicago truncatula
Medtr8g089300 1.0kb downstream 1.0kb downstream 1000   false chr8: 37098766-37099765 Medicago truncatula
Medtr8g089300 2.0kb upstream 2.0kb upstream 3199   true chr8: 37099766-37102964 Medicago truncatula
Medtr8g089300 2.0kb upstream 2.0kb upstream 2000   false chr8: 37100965-37102964 Medicago truncatula
Medtr8g089300 2.0kb downstream 2.0kb downstream 3199   true chr8: 37097766-37100964 Medicago truncatula
Medtr8g089300 2.0kb downstream 2.0kb downstream 2000   false chr8: 37097766-37099765 Medicago truncatula
Medtr8g089300 5.0kb upstream 5.0kb upstream 6199   true chr8: 37099766-37105964 Medicago truncatula
Medtr8g089300 5.0kb upstream 5.0kb upstream 5000   false chr8: 37100965-37105964 Medicago truncatula
Medtr8g089300 5.0kb downstream 5.0kb downstream 6199   true chr8: 37094766-37100964 Medicago truncatula
Medtr8g089300 5.0kb downstream 5.0kb downstream 5000   false chr8: 37094766-37099765 Medicago truncatula
Medtr8g089300 10.0kb upstream 10.0kb upstream 11199   true chr8: 37099766-37110964 Medicago truncatula
Medtr8g089300 10.0kb upstream 10.0kb upstream 10000   false chr8: 37100965-37110964 Medicago truncatula
Medtr8g089300 10.0kb downstream 10.0kb downstream 11199   true chr8: 37089766-37100964 Medicago truncatula
Medtr8g089300 10.0kb downstream 10.0kb downstream 10000   false chr8: 37089766-37099765 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313563 5265 Fabidae View MSA
124065641 5270 Rosid View MSA
123739206 5271 Pentapetalae View MSA
122793621 5272 Eudicot View MSA
122046791 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.851        
cufflinks 0.044     Low Low
cufflinks 0.013     Low Low
cufflinks 1.131        
cufflinks 0.097        
cufflinks 1.051        
cufflinks 9.809       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.74       High

0 Strain