Gene : Medtr8g088940 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN Description:  emp24/gp25L/p24 family protein
Genomic Order:  4579 Name:  ? Medtr8g088940
Secondary Identifier:  ? PAC:31072175
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g088940 0.5kb upstream 0.5kb upstream 3130   true chr8: 36955367-36958496 Medicago truncatula
Medtr8g088940 0.5kb upstream 0.5kb upstream 500   false chr8: 36955367-36955866 Medicago truncatula
Medtr8g088940 0.5kb downstream 0.5kb downstream 3130   true chr8: 36955867-36958996 Medicago truncatula
Medtr8g088940 0.5kb downstream 0.5kb downstream 500   false chr8: 36958497-36958996 Medicago truncatula
Medtr8g088940 1.0kb upstream 1.0kb upstream 3630   true chr8: 36954867-36958496 Medicago truncatula
Medtr8g088940 1.0kb upstream 1.0kb upstream 1000   false chr8: 36954867-36955866 Medicago truncatula
Medtr8g088940 1.0kb downstream 1.0kb downstream 3630   true chr8: 36955867-36959496 Medicago truncatula
Medtr8g088940 1.0kb downstream 1.0kb downstream 1000   false chr8: 36958497-36959496 Medicago truncatula
Medtr8g088940 2.0kb upstream 2.0kb upstream 4630   true chr8: 36953867-36958496 Medicago truncatula
Medtr8g088940 2.0kb upstream 2.0kb upstream 2000   false chr8: 36953867-36955866 Medicago truncatula
Medtr8g088940 2.0kb downstream 2.0kb downstream 4630   true chr8: 36955867-36960496 Medicago truncatula
Medtr8g088940 2.0kb downstream 2.0kb downstream 2000   false chr8: 36958497-36960496 Medicago truncatula
Medtr8g088940 5.0kb upstream 5.0kb upstream 7630   true chr8: 36950867-36958496 Medicago truncatula
Medtr8g088940 5.0kb upstream 5.0kb upstream 5000   false chr8: 36950867-36955866 Medicago truncatula
Medtr8g088940 5.0kb downstream 5.0kb downstream 7630   true chr8: 36955867-36963496 Medicago truncatula
Medtr8g088940 5.0kb downstream 5.0kb downstream 5000   false chr8: 36958497-36963496 Medicago truncatula
Medtr8g088940 10.0kb upstream 10.0kb upstream 12630   true chr8: 36945867-36958496 Medicago truncatula
Medtr8g088940 10.0kb upstream 10.0kb upstream 10000   false chr8: 36945867-36955866 Medicago truncatula
Medtr8g088940 10.0kb downstream 10.0kb downstream 12630   true chr8: 36955867-36968496 Medicago truncatula
Medtr8g088940 10.0kb downstream 10.0kb downstream 10000   false chr8: 36958497-36968496 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312358 5265 Fabidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.597       High
cufflinks 1.545        
cufflinks 1.18       Low
cufflinks 2.579        
cufflinks 1.791        
cufflinks 1.4        
cufflinks 3.308        
cufflinks 1.056       Low
cufflinks 3.029        

0 Strain