Gene : Medtr8g089665 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31263:SF0 - CELLULASE (GLYCOSYL HYDROLASE FAMILY 5) PROTEIN-RELATED Description:  cellulase (glycosyl hydrolase family 5)
Genomic Order:  4635 Name:  ? Medtr8g089665
Secondary Identifier:  ? PAC:31073963
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g089665 0.5kb upstream 0.5kb upstream 4265   true chr8: 37312083-37316347 Medicago truncatula
Medtr8g089665 0.5kb upstream 0.5kb upstream 500   false chr8: 37315848-37316347 Medicago truncatula
Medtr8g089665 0.5kb downstream 0.5kb downstream 4265   true chr8: 37311583-37315847 Medicago truncatula
Medtr8g089665 0.5kb downstream 0.5kb downstream 500   false chr8: 37311583-37312082 Medicago truncatula
Medtr8g089665 1.0kb upstream 1.0kb upstream 4765   true chr8: 37312083-37316847 Medicago truncatula
Medtr8g089665 1.0kb upstream 1.0kb upstream 1000   false chr8: 37315848-37316847 Medicago truncatula
Medtr8g089665 1.0kb downstream 1.0kb downstream 4765   true chr8: 37311083-37315847 Medicago truncatula
Medtr8g089665 1.0kb downstream 1.0kb downstream 1000   false chr8: 37311083-37312082 Medicago truncatula
Medtr8g089665 2.0kb upstream 2.0kb upstream 5765   true chr8: 37312083-37317847 Medicago truncatula
Medtr8g089665 2.0kb upstream 2.0kb upstream 2000   false chr8: 37315848-37317847 Medicago truncatula
Medtr8g089665 2.0kb downstream 2.0kb downstream 5765   true chr8: 37310083-37315847 Medicago truncatula
Medtr8g089665 2.0kb downstream 2.0kb downstream 2000   false chr8: 37310083-37312082 Medicago truncatula
Medtr8g089665 5.0kb upstream 5.0kb upstream 8765   true chr8: 37312083-37320847 Medicago truncatula
Medtr8g089665 5.0kb upstream 5.0kb upstream 5000   false chr8: 37315848-37320847 Medicago truncatula
Medtr8g089665 5.0kb downstream 5.0kb downstream 8765   true chr8: 37307083-37315847 Medicago truncatula
Medtr8g089665 5.0kb downstream 5.0kb downstream 5000   false chr8: 37307083-37312082 Medicago truncatula
Medtr8g089665 10.0kb upstream 10.0kb upstream 13765   true chr8: 37312083-37325847 Medicago truncatula
Medtr8g089665 10.0kb upstream 10.0kb upstream 10000   false chr8: 37315848-37325847 Medicago truncatula
Medtr8g089665 10.0kb downstream 10.0kb downstream 13765   true chr8: 37302083-37315847 Medicago truncatula
Medtr8g089665 10.0kb downstream 10.0kb downstream 10000   false chr8: 37302083-37312082 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027175 5273 Angiosperm View MSA
122307005 5265 Fabidae View MSA
124061714 5270 Rosid View MSA
123740079 5271 Pentapetalae View MSA
122789324 5272 Eudicot View MSA
121351116 5274 Embryophyte View MSA
123426514 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.468        
cufflinks 1.05       High
cufflinks 0.539        
cufflinks 0.185        
cufflinks 0.965       High
cufflinks 0.088     Low Low
cufflinks 0.242        
cufflinks 0.97       High
cufflinks 0.23        

0 Strain