Gene : Medtr8g090165 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR32387:SF3 - ATP/DNA BINDING PROTEIN Description:  ATP/DNA-binding protein
Genomic Order:  4706 Name:  ? Medtr8g090165
Secondary Identifier:  ? PAC:31073175
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g090165 0.5kb upstream 0.5kb upstream 6759   true chr8: 37794068-37800826 Medicago truncatula
Medtr8g090165 0.5kb upstream 0.5kb upstream 500   false chr8: 37800327-37800826 Medicago truncatula
Medtr8g090165 0.5kb downstream 0.5kb downstream 6759   true chr8: 37793568-37800326 Medicago truncatula
Medtr8g090165 0.5kb downstream 0.5kb downstream 500   false chr8: 37793568-37794067 Medicago truncatula
Medtr8g090165 1.0kb upstream 1.0kb upstream 7259   true chr8: 37794068-37801326 Medicago truncatula
Medtr8g090165 1.0kb upstream 1.0kb upstream 1000   false chr8: 37800327-37801326 Medicago truncatula
Medtr8g090165 1.0kb downstream 1.0kb downstream 7259   true chr8: 37793068-37800326 Medicago truncatula
Medtr8g090165 1.0kb downstream 1.0kb downstream 1000   false chr8: 37793068-37794067 Medicago truncatula
Medtr8g090165 2.0kb upstream 2.0kb upstream 8259   true chr8: 37794068-37802326 Medicago truncatula
Medtr8g090165 2.0kb upstream 2.0kb upstream 2000   false chr8: 37800327-37802326 Medicago truncatula
Medtr8g090165 2.0kb downstream 2.0kb downstream 8259   true chr8: 37792068-37800326 Medicago truncatula
Medtr8g090165 2.0kb downstream 2.0kb downstream 2000   false chr8: 37792068-37794067 Medicago truncatula
Medtr8g090165 5.0kb upstream 5.0kb upstream 11259   true chr8: 37794068-37805326 Medicago truncatula
Medtr8g090165 5.0kb upstream 5.0kb upstream 5000   false chr8: 37800327-37805326 Medicago truncatula
Medtr8g090165 5.0kb downstream 5.0kb downstream 11259   true chr8: 37789068-37800326 Medicago truncatula
Medtr8g090165 5.0kb downstream 5.0kb downstream 5000   false chr8: 37789068-37794067 Medicago truncatula
Medtr8g090165 10.0kb upstream 10.0kb upstream 16259   true chr8: 37794068-37810326 Medicago truncatula
Medtr8g090165 10.0kb upstream 10.0kb upstream 10000   false chr8: 37800327-37810326 Medicago truncatula
Medtr8g090165 10.0kb downstream 10.0kb downstream 16259   true chr8: 37784068-37800326 Medicago truncatula
Medtr8g090165 10.0kb downstream 10.0kb downstream 10000   false chr8: 37784068-37794067 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299263 5265 Fabidae View MSA
124072645 5270 Rosid View MSA
123743971 5271 Pentapetalae View MSA
122792746 5272 Eudicot View MSA
122050414 5273 Angiosperm View MSA
121347481 5274 Embryophyte View MSA
123380559 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.796       High
cufflinks 0.115        
cufflinks 0.067     Low  
cufflinks 0.045     Low Low
cufflinks 0.073        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.071     Low  
cufflinks 0.091        
cufflinks 0.158        

0 Strain