Gene : Medtr8g090125 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR24093:SF296 - CALCIUM-TRANSPORTING ATPASE 4, PLASMA MEMBRANE-TYPE-RELATED Description:  membrane calcium-translocating P-type ATPase
Genomic Order:  4700 Name:  ? Medtr8g090125
Secondary Identifier:  ? PAC:31070004
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g090125 0.5kb upstream 0.5kb upstream 5338   true chr8: 37754679-37760016 Medicago truncatula
Medtr8g090125 0.5kb upstream 0.5kb upstream 500   false chr8: 37754679-37755178 Medicago truncatula
Medtr8g090125 0.5kb downstream 0.5kb downstream 5338   true chr8: 37755179-37760516 Medicago truncatula
Medtr8g090125 0.5kb downstream 0.5kb downstream 500   false chr8: 37760017-37760516 Medicago truncatula
Medtr8g090125 1.0kb upstream 1.0kb upstream 5838   true chr8: 37754179-37760016 Medicago truncatula
Medtr8g090125 1.0kb upstream 1.0kb upstream 1000   false chr8: 37754179-37755178 Medicago truncatula
Medtr8g090125 1.0kb downstream 1.0kb downstream 5838   true chr8: 37755179-37761016 Medicago truncatula
Medtr8g090125 1.0kb downstream 1.0kb downstream 1000   false chr8: 37760017-37761016 Medicago truncatula
Medtr8g090125 2.0kb upstream 2.0kb upstream 6838   true chr8: 37753179-37760016 Medicago truncatula
Medtr8g090125 2.0kb upstream 2.0kb upstream 2000   false chr8: 37753179-37755178 Medicago truncatula
Medtr8g090125 2.0kb downstream 2.0kb downstream 6838   true chr8: 37755179-37762016 Medicago truncatula
Medtr8g090125 2.0kb downstream 2.0kb downstream 2000   false chr8: 37760017-37762016 Medicago truncatula
Medtr8g090125 5.0kb upstream 5.0kb upstream 9838   true chr8: 37750179-37760016 Medicago truncatula
Medtr8g090125 5.0kb upstream 5.0kb upstream 5000   false chr8: 37750179-37755178 Medicago truncatula
Medtr8g090125 5.0kb downstream 5.0kb downstream 9838   true chr8: 37755179-37765016 Medicago truncatula
Medtr8g090125 5.0kb downstream 5.0kb downstream 5000   false chr8: 37760017-37765016 Medicago truncatula
Medtr8g090125 10.0kb upstream 10.0kb upstream 14838   true chr8: 37745179-37760016 Medicago truncatula
Medtr8g090125 10.0kb upstream 10.0kb upstream 10000   false chr8: 37745179-37755178 Medicago truncatula
Medtr8g090125 10.0kb downstream 10.0kb downstream 14838   true chr8: 37755179-37770016 Medicago truncatula
Medtr8g090125 10.0kb downstream 10.0kb downstream 10000   false chr8: 37760017-37770016 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310149 5265 Fabidae View MSA
124070043 5270 Rosid View MSA
123738336 5271 Pentapetalae View MSA
122786540 5272 Eudicot View MSA
122043191 5273 Angiosperm View MSA
121349207 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.548        
cufflinks 4.612        
cufflinks 5.17       High
cufflinks 1.02       Low
cufflinks 3.138        
cufflinks 1.863        
cufflinks 4.828        
cufflinks 3.065        
cufflinks 4.107        

0 Strain