Gene : Medtr8g089985 M. truncatula Mt4.0v1
Defline:  (1 of 21) KOG0087 - GTPase Rab11/YPT3, small G protein superfamily Description:  RAB GTPase-like protein A1D
Genomic Order:  4683 Name:  ? Medtr8g089985
Secondary Identifier:  ? PAC:31071224
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g089985 0.5kb upstream 0.5kb upstream 3204   true chr8: 37624788-37627991 Medicago truncatula
Medtr8g089985 0.5kb upstream 0.5kb upstream 500   false chr8: 37627492-37627991 Medicago truncatula
Medtr8g089985 0.5kb downstream 0.5kb downstream 3204   true chr8: 37624288-37627491 Medicago truncatula
Medtr8g089985 0.5kb downstream 0.5kb downstream 500   false chr8: 37624288-37624787 Medicago truncatula
Medtr8g089985 1.0kb upstream 1.0kb upstream 3704   true chr8: 37624788-37628491 Medicago truncatula
Medtr8g089985 1.0kb upstream 1.0kb upstream 1000   false chr8: 37627492-37628491 Medicago truncatula
Medtr8g089985 1.0kb downstream 1.0kb downstream 3704   true chr8: 37623788-37627491 Medicago truncatula
Medtr8g089985 1.0kb downstream 1.0kb downstream 1000   false chr8: 37623788-37624787 Medicago truncatula
Medtr8g089985 2.0kb upstream 2.0kb upstream 4704   true chr8: 37624788-37629491 Medicago truncatula
Medtr8g089985 2.0kb upstream 2.0kb upstream 2000   false chr8: 37627492-37629491 Medicago truncatula
Medtr8g089985 2.0kb downstream 2.0kb downstream 4704   true chr8: 37622788-37627491 Medicago truncatula
Medtr8g089985 2.0kb downstream 2.0kb downstream 2000   false chr8: 37622788-37624787 Medicago truncatula
Medtr8g089985 5.0kb upstream 5.0kb upstream 7704   true chr8: 37624788-37632491 Medicago truncatula
Medtr8g089985 5.0kb upstream 5.0kb upstream 5000   false chr8: 37627492-37632491 Medicago truncatula
Medtr8g089985 5.0kb downstream 5.0kb downstream 7704   true chr8: 37619788-37627491 Medicago truncatula
Medtr8g089985 5.0kb downstream 5.0kb downstream 5000   false chr8: 37619788-37624787 Medicago truncatula
Medtr8g089985 10.0kb upstream 10.0kb upstream 12704   true chr8: 37624788-37637491 Medicago truncatula
Medtr8g089985 10.0kb upstream 10.0kb upstream 10000   false chr8: 37627492-37637491 Medicago truncatula
Medtr8g089985 10.0kb downstream 10.0kb downstream 12704   true chr8: 37614788-37627491 Medicago truncatula
Medtr8g089985 10.0kb downstream 10.0kb downstream 10000   false chr8: 37614788-37624787 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312719 5265 Fabidae View MSA
124067588 5270 Rosid View MSA
123750991 5271 Pentapetalae View MSA
122787491 5272 Eudicot View MSA
122047606 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.475     High High
cufflinks 15.168     High  
cufflinks 15.422     High  
cufflinks 8.258        
cufflinks 16.731     High  
cufflinks 4.401       Low
cufflinks 14.266     High  
cufflinks 11.516     High  
cufflinks 27.133     High High

0 Strain