Gene : Medtr8g089920 M. truncatula Mt4.0v1
Description:  Avr9/Cf-9 rapidly elicited protein, putative Genomic Order:  4672
Name:  ? Medtr8g089920 Secondary Identifier:  ? PAC:31073753
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g089920 0.5kb upstream 0.5kb upstream 950   true chr8: 37547335-37548284 Medicago truncatula
Medtr8g089920 0.5kb upstream 0.5kb upstream 500   false chr8: 37547335-37547834 Medicago truncatula
Medtr8g089920 0.5kb downstream 0.5kb downstream 950   true chr8: 37547835-37548784 Medicago truncatula
Medtr8g089920 0.5kb downstream 0.5kb downstream 500   false chr8: 37548285-37548784 Medicago truncatula
Medtr8g089920 1.0kb upstream 1.0kb upstream 1450   true chr8: 37546835-37548284 Medicago truncatula
Medtr8g089920 1.0kb upstream 1.0kb upstream 1000   false chr8: 37546835-37547834 Medicago truncatula
Medtr8g089920 1.0kb downstream 1.0kb downstream 1450   true chr8: 37547835-37549284 Medicago truncatula
Medtr8g089920 1.0kb downstream 1.0kb downstream 1000   false chr8: 37548285-37549284 Medicago truncatula
Medtr8g089920 2.0kb upstream 2.0kb upstream 2450   true chr8: 37545835-37548284 Medicago truncatula
Medtr8g089920 2.0kb upstream 2.0kb upstream 2000   false chr8: 37545835-37547834 Medicago truncatula
Medtr8g089920 2.0kb downstream 2.0kb downstream 2450   true chr8: 37547835-37550284 Medicago truncatula
Medtr8g089920 2.0kb downstream 2.0kb downstream 2000   false chr8: 37548285-37550284 Medicago truncatula
Medtr8g089920 5.0kb upstream 5.0kb upstream 5450   true chr8: 37542835-37548284 Medicago truncatula
Medtr8g089920 5.0kb upstream 5.0kb upstream 5000   false chr8: 37542835-37547834 Medicago truncatula
Medtr8g089920 5.0kb downstream 5.0kb downstream 5450   true chr8: 37547835-37553284 Medicago truncatula
Medtr8g089920 5.0kb downstream 5.0kb downstream 5000   false chr8: 37548285-37553284 Medicago truncatula
Medtr8g089920 10.0kb upstream 10.0kb upstream 10450   true chr8: 37537835-37548284 Medicago truncatula
Medtr8g089920 10.0kb upstream 10.0kb upstream 10000   false chr8: 37537835-37547834 Medicago truncatula
Medtr8g089920 10.0kb downstream 10.0kb downstream 10450   true chr8: 37547835-37558284 Medicago truncatula
Medtr8g089920 10.0kb downstream 10.0kb downstream 10000   false chr8: 37548285-37558284 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297709 5265 Fabidae View MSA
124071239 5270 Rosid View MSA
123750845 5271 Pentapetalae View MSA
122791847 5272 Eudicot View MSA
122049907 5273 Angiosperm View MSA
121311645 5274 Embryophyte View MSA
123348915 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.757     High  
cufflinks 6.785       Low
cufflinks 12.265     High  
cufflinks 82.939     High  
cufflinks 8.637       Low
cufflinks 114.904     High  
cufflinks 166.824     High High
cufflinks 6.994       Low
cufflinks 113.284     High  

0 Strain