Gene : Medtr8g091390 M. truncatula Mt4.0v1
Defline:  (1 of 1) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Description:  L-ascorbate oxidase
Genomic Order:  4750 Name:  ? Medtr8g091390
Secondary Identifier:  ? PAC:31075622
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5466 Medicago truncatula pathologic  
Mtruncatula PWY-6824 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g091390 0.5kb upstream 0.5kb upstream 3988   true chr8: 38115766-38119753 Medicago truncatula
Medtr8g091390 0.5kb upstream 0.5kb upstream 500   false chr8: 38115766-38116265 Medicago truncatula
Medtr8g091390 0.5kb downstream 0.5kb downstream 3988   true chr8: 38116266-38120253 Medicago truncatula
Medtr8g091390 0.5kb downstream 0.5kb downstream 500   false chr8: 38119754-38120253 Medicago truncatula
Medtr8g091390 1.0kb upstream 1.0kb upstream 4488   true chr8: 38115266-38119753 Medicago truncatula
Medtr8g091390 1.0kb upstream 1.0kb upstream 1000   false chr8: 38115266-38116265 Medicago truncatula
Medtr8g091390 1.0kb downstream 1.0kb downstream 4488   true chr8: 38116266-38120753 Medicago truncatula
Medtr8g091390 1.0kb downstream 1.0kb downstream 1000   false chr8: 38119754-38120753 Medicago truncatula
Medtr8g091390 2.0kb upstream 2.0kb upstream 5488   true chr8: 38114266-38119753 Medicago truncatula
Medtr8g091390 2.0kb upstream 2.0kb upstream 2000   false chr8: 38114266-38116265 Medicago truncatula
Medtr8g091390 2.0kb downstream 2.0kb downstream 5488   true chr8: 38116266-38121753 Medicago truncatula
Medtr8g091390 2.0kb downstream 2.0kb downstream 2000   false chr8: 38119754-38121753 Medicago truncatula
Medtr8g091390 5.0kb upstream 5.0kb upstream 8488   true chr8: 38111266-38119753 Medicago truncatula
Medtr8g091390 5.0kb upstream 5.0kb upstream 5000   false chr8: 38111266-38116265 Medicago truncatula
Medtr8g091390 5.0kb downstream 5.0kb downstream 8488   true chr8: 38116266-38124753 Medicago truncatula
Medtr8g091390 5.0kb downstream 5.0kb downstream 5000   false chr8: 38119754-38124753 Medicago truncatula
Medtr8g091390 10.0kb upstream 10.0kb upstream 13488   true chr8: 38106266-38119753 Medicago truncatula
Medtr8g091390 10.0kb upstream 10.0kb upstream 10000   false chr8: 38106266-38116265 Medicago truncatula
Medtr8g091390 10.0kb downstream 10.0kb downstream 13488   true chr8: 38116266-38129753 Medicago truncatula
Medtr8g091390 10.0kb downstream 10.0kb downstream 10000   false chr8: 38119754-38129753 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305674 5265 Fabidae View MSA
124065870 5270 Rosid View MSA
123745907 5271 Pentapetalae View MSA
122793198 5272 Eudicot View MSA
122046121 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.166     High High
cufflinks 15.359     High Low
cufflinks 44.106     High  
cufflinks 12.025     High Low
cufflinks 24.292     High  
cufflinks 55.129     High  
cufflinks 35.857     High  
cufflinks 23.633     High  
cufflinks 62.6     High High

0 Strain