Gene : Medtr8g090220 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR32370:SF37 - BTB/POZ DOMAIN-CONTAINING PROTEIN DOT3-RELATED Description:  phototropic-responsive NPH3 family protein
Genomic Order:  4715 Name:  ? Medtr8g090220
Secondary Identifier:  ? PAC:31074055
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g090220 0.5kb upstream 0.5kb upstream 4675   true chr8: 37857865-37862539 Medicago truncatula
Medtr8g090220 0.5kb upstream 0.5kb upstream 500   false chr8: 37857865-37858364 Medicago truncatula
Medtr8g090220 0.5kb downstream 0.5kb downstream 4675   true chr8: 37858365-37863039 Medicago truncatula
Medtr8g090220 0.5kb downstream 0.5kb downstream 500   false chr8: 37862540-37863039 Medicago truncatula
Medtr8g090220 1.0kb upstream 1.0kb upstream 5175   true chr8: 37857365-37862539 Medicago truncatula
Medtr8g090220 1.0kb upstream 1.0kb upstream 1000   false chr8: 37857365-37858364 Medicago truncatula
Medtr8g090220 1.0kb downstream 1.0kb downstream 5175   true chr8: 37858365-37863539 Medicago truncatula
Medtr8g090220 1.0kb downstream 1.0kb downstream 1000   false chr8: 37862540-37863539 Medicago truncatula
Medtr8g090220 2.0kb upstream 2.0kb upstream 6175   true chr8: 37856365-37862539 Medicago truncatula
Medtr8g090220 2.0kb upstream 2.0kb upstream 2000   false chr8: 37856365-37858364 Medicago truncatula
Medtr8g090220 2.0kb downstream 2.0kb downstream 6175   true chr8: 37858365-37864539 Medicago truncatula
Medtr8g090220 2.0kb downstream 2.0kb downstream 2000   false chr8: 37862540-37864539 Medicago truncatula
Medtr8g090220 5.0kb upstream 5.0kb upstream 9175   true chr8: 37853365-37862539 Medicago truncatula
Medtr8g090220 5.0kb upstream 5.0kb upstream 5000   false chr8: 37853365-37858364 Medicago truncatula
Medtr8g090220 5.0kb downstream 5.0kb downstream 9175   true chr8: 37858365-37867539 Medicago truncatula
Medtr8g090220 5.0kb downstream 5.0kb downstream 5000   false chr8: 37862540-37867539 Medicago truncatula
Medtr8g090220 10.0kb upstream 10.0kb upstream 14175   true chr8: 37848365-37862539 Medicago truncatula
Medtr8g090220 10.0kb upstream 10.0kb upstream 10000   false chr8: 37848365-37858364 Medicago truncatula
Medtr8g090220 10.0kb downstream 10.0kb downstream 14175   true chr8: 37858365-37872539 Medicago truncatula
Medtr8g090220 10.0kb downstream 10.0kb downstream 10000   false chr8: 37862540-37872539 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302011 5265 Fabidae View MSA
124072308 5270 Rosid View MSA
123746549 5271 Pentapetalae View MSA
122794613 5272 Eudicot View MSA
122049761 5273 Angiosperm View MSA
121347435 5274 Embryophyte View MSA
123380549 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.002     Low Low
cufflinks 0.998        
cufflinks 1.19        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.228        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 1.067        
cufflinks 0.004     Low  

0 Strain