Gene : Medtr8g091670 M. truncatula Mt4.0v1
Defline:  (1 of 43) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Description:  PPR containing plant-like protein
Genomic Order:  4770 Name:  ? Medtr8g091670
Secondary Identifier:  ? PAC:31075738
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g091670 0.5kb upstream 0.5kb upstream 6994   true chr8: 38248553-38255546 Medicago truncatula
Medtr8g091670 0.5kb upstream 0.5kb upstream 500   false chr8: 38255047-38255546 Medicago truncatula
Medtr8g091670 0.5kb downstream 0.5kb downstream 6994   true chr8: 38248053-38255046 Medicago truncatula
Medtr8g091670 0.5kb downstream 0.5kb downstream 500   false chr8: 38248053-38248552 Medicago truncatula
Medtr8g091670 1.0kb upstream 1.0kb upstream 7494   true chr8: 38248553-38256046 Medicago truncatula
Medtr8g091670 1.0kb upstream 1.0kb upstream 1000   false chr8: 38255047-38256046 Medicago truncatula
Medtr8g091670 1.0kb downstream 1.0kb downstream 7494   true chr8: 38247553-38255046 Medicago truncatula
Medtr8g091670 1.0kb downstream 1.0kb downstream 1000   false chr8: 38247553-38248552 Medicago truncatula
Medtr8g091670 2.0kb upstream 2.0kb upstream 8494   true chr8: 38248553-38257046 Medicago truncatula
Medtr8g091670 2.0kb upstream 2.0kb upstream 2000   false chr8: 38255047-38257046 Medicago truncatula
Medtr8g091670 2.0kb downstream 2.0kb downstream 8494   true chr8: 38246553-38255046 Medicago truncatula
Medtr8g091670 2.0kb downstream 2.0kb downstream 2000   false chr8: 38246553-38248552 Medicago truncatula
Medtr8g091670 5.0kb upstream 5.0kb upstream 11494   true chr8: 38248553-38260046 Medicago truncatula
Medtr8g091670 5.0kb upstream 5.0kb upstream 5000   false chr8: 38255047-38260046 Medicago truncatula
Medtr8g091670 5.0kb downstream 5.0kb downstream 11494   true chr8: 38243553-38255046 Medicago truncatula
Medtr8g091670 5.0kb downstream 5.0kb downstream 5000   false chr8: 38243553-38248552 Medicago truncatula
Medtr8g091670 10.0kb upstream 10.0kb upstream 16494   true chr8: 38248553-38265046 Medicago truncatula
Medtr8g091670 10.0kb upstream 10.0kb upstream 10000   false chr8: 38255047-38265046 Medicago truncatula
Medtr8g091670 10.0kb downstream 10.0kb downstream 16494   true chr8: 38238553-38255046 Medicago truncatula
Medtr8g091670 10.0kb downstream 10.0kb downstream 10000   false chr8: 38238553-38248552 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314844 5265 Fabidae View MSA
124065568 5270 Rosid View MSA
123738247 5271 Pentapetalae View MSA
122787727 5272 Eudicot View MSA
122046290 5273 Angiosperm View MSA
121345474 5274 Embryophyte View MSA
123380225 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.375        
cufflinks 1.924        
cufflinks 2.476        
cufflinks 0.105       Low
cufflinks 3.33       High
cufflinks 0.07     Low Low
cufflinks 0.463        
cufflinks 2.48        
cufflinks 0.3        

0 Strain