Gene : Medtr8g079502 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR11945:SF229 - F23H11.23 PROTEIN-RELATED Description:  MADS-box transcription factor family protein
Genomic Order:  4161 Name:  ? Medtr8g079502
Secondary Identifier:  ? PAC:31071191
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g079502 0.5kb upstream 0.5kb upstream 1046   true chr8: 34105187-34106232 Medicago truncatula
Medtr8g079502 0.5kb upstream 0.5kb upstream 500   false chr8: 34105187-34105686 Medicago truncatula
Medtr8g079502 0.5kb downstream 0.5kb downstream 1046   true chr8: 34105687-34106732 Medicago truncatula
Medtr8g079502 0.5kb downstream 0.5kb downstream 500   false chr8: 34106233-34106732 Medicago truncatula
Medtr8g079502 1.0kb upstream 1.0kb upstream 1546   true chr8: 34104687-34106232 Medicago truncatula
Medtr8g079502 1.0kb upstream 1.0kb upstream 1000   false chr8: 34104687-34105686 Medicago truncatula
Medtr8g079502 1.0kb downstream 1.0kb downstream 1546   true chr8: 34105687-34107232 Medicago truncatula
Medtr8g079502 1.0kb downstream 1.0kb downstream 1000   false chr8: 34106233-34107232 Medicago truncatula
Medtr8g079502 2.0kb upstream 2.0kb upstream 2546   true chr8: 34103687-34106232 Medicago truncatula
Medtr8g079502 2.0kb upstream 2.0kb upstream 2000   false chr8: 34103687-34105686 Medicago truncatula
Medtr8g079502 2.0kb downstream 2.0kb downstream 2546   true chr8: 34105687-34108232 Medicago truncatula
Medtr8g079502 2.0kb downstream 2.0kb downstream 2000   false chr8: 34106233-34108232 Medicago truncatula
Medtr8g079502 5.0kb upstream 5.0kb upstream 5546   true chr8: 34100687-34106232 Medicago truncatula
Medtr8g079502 5.0kb upstream 5.0kb upstream 5000   false chr8: 34100687-34105686 Medicago truncatula
Medtr8g079502 5.0kb downstream 5.0kb downstream 5546   true chr8: 34105687-34111232 Medicago truncatula
Medtr8g079502 5.0kb downstream 5.0kb downstream 5000   false chr8: 34106233-34111232 Medicago truncatula
Medtr8g079502 10.0kb upstream 10.0kb upstream 10546   true chr8: 34095687-34106232 Medicago truncatula
Medtr8g079502 10.0kb upstream 10.0kb upstream 10000   false chr8: 34095687-34105686 Medicago truncatula
Medtr8g079502 10.0kb downstream 10.0kb downstream 10546   true chr8: 34105687-34116232 Medicago truncatula
Medtr8g079502 10.0kb downstream 10.0kb downstream 10000   false chr8: 34106233-34116232 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311335 5265 Fabidae View MSA
124050462 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.998        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain