Gene : Medtr8g079492 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31384:SF3 - AUXIN RESPONSE FACTOR 6 Description:  auxin response factor 2
Genomic Order:  4158 Name:  ? Medtr8g079492
Secondary Identifier:  ? PAC:31073586
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g079492 0.5kb upstream 0.5kb upstream 7704   true chr8: 34077764-34085467 Medicago truncatula
Medtr8g079492 0.5kb upstream 0.5kb upstream 500   false chr8: 34084968-34085467 Medicago truncatula
Medtr8g079492 0.5kb downstream 0.5kb downstream 7704   true chr8: 34077264-34084967 Medicago truncatula
Medtr8g079492 0.5kb downstream 0.5kb downstream 500   false chr8: 34077264-34077763 Medicago truncatula
Medtr8g079492 1.0kb upstream 1.0kb upstream 8204   true chr8: 34077764-34085967 Medicago truncatula
Medtr8g079492 1.0kb upstream 1.0kb upstream 1000   false chr8: 34084968-34085967 Medicago truncatula
Medtr8g079492 1.0kb downstream 1.0kb downstream 8204   true chr8: 34076764-34084967 Medicago truncatula
Medtr8g079492 1.0kb downstream 1.0kb downstream 1000   false chr8: 34076764-34077763 Medicago truncatula
Medtr8g079492 2.0kb upstream 2.0kb upstream 9204   true chr8: 34077764-34086967 Medicago truncatula
Medtr8g079492 2.0kb upstream 2.0kb upstream 2000   false chr8: 34084968-34086967 Medicago truncatula
Medtr8g079492 2.0kb downstream 2.0kb downstream 9204   true chr8: 34075764-34084967 Medicago truncatula
Medtr8g079492 2.0kb downstream 2.0kb downstream 2000   false chr8: 34075764-34077763 Medicago truncatula
Medtr8g079492 5.0kb upstream 5.0kb upstream 12204   true chr8: 34077764-34089967 Medicago truncatula
Medtr8g079492 5.0kb upstream 5.0kb upstream 5000   false chr8: 34084968-34089967 Medicago truncatula
Medtr8g079492 5.0kb downstream 5.0kb downstream 12204   true chr8: 34072764-34084967 Medicago truncatula
Medtr8g079492 5.0kb downstream 5.0kb downstream 5000   false chr8: 34072764-34077763 Medicago truncatula
Medtr8g079492 10.0kb upstream 10.0kb upstream 17204   true chr8: 34077764-34094967 Medicago truncatula
Medtr8g079492 10.0kb upstream 10.0kb upstream 10000   false chr8: 34084968-34094967 Medicago truncatula
Medtr8g079492 10.0kb downstream 10.0kb downstream 17204   true chr8: 34067764-34084967 Medicago truncatula
Medtr8g079492 10.0kb downstream 10.0kb downstream 10000   false chr8: 34067764-34077763 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297272 5265 Fabidae View MSA
124035968 5270 Rosid View MSA
123609403 5271 Pentapetalae View MSA
122644051 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.631       Low
cufflinks 8.313       High
cufflinks 8.057       High
cufflinks 1.469        
cufflinks 8.269       High
cufflinks 0.963       Low
cufflinks 2.245        
cufflinks 6.939        
cufflinks 1.827        

0 Strain