Gene : Medtr8g079690 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11071:SF259 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 Description:  peptidyl-prolyl cis-trans isomerase D
Genomic Order:  4172 Name:  ? Medtr8g079690
Secondary Identifier:  ? PAC:31075751
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g079690 0.5kb upstream 0.5kb upstream 5009   true chr8: 34165986-34170994 Medicago truncatula
Medtr8g079690 0.5kb upstream 0.5kb upstream 500   false chr8: 34165986-34166485 Medicago truncatula
Medtr8g079690 0.5kb downstream 0.5kb downstream 5009   true chr8: 34166486-34171494 Medicago truncatula
Medtr8g079690 0.5kb downstream 0.5kb downstream 500   false chr8: 34170995-34171494 Medicago truncatula
Medtr8g079690 1.0kb upstream 1.0kb upstream 5509   true chr8: 34165486-34170994 Medicago truncatula
Medtr8g079690 1.0kb upstream 1.0kb upstream 1000   false chr8: 34165486-34166485 Medicago truncatula
Medtr8g079690 1.0kb downstream 1.0kb downstream 5509   true chr8: 34166486-34171994 Medicago truncatula
Medtr8g079690 1.0kb downstream 1.0kb downstream 1000   false chr8: 34170995-34171994 Medicago truncatula
Medtr8g079690 2.0kb upstream 2.0kb upstream 6509   true chr8: 34164486-34170994 Medicago truncatula
Medtr8g079690 2.0kb upstream 2.0kb upstream 2000   false chr8: 34164486-34166485 Medicago truncatula
Medtr8g079690 2.0kb downstream 2.0kb downstream 6509   true chr8: 34166486-34172994 Medicago truncatula
Medtr8g079690 2.0kb downstream 2.0kb downstream 2000   false chr8: 34170995-34172994 Medicago truncatula
Medtr8g079690 5.0kb upstream 5.0kb upstream 9509   true chr8: 34161486-34170994 Medicago truncatula
Medtr8g079690 5.0kb upstream 5.0kb upstream 5000   false chr8: 34161486-34166485 Medicago truncatula
Medtr8g079690 5.0kb downstream 5.0kb downstream 9509   true chr8: 34166486-34175994 Medicago truncatula
Medtr8g079690 5.0kb downstream 5.0kb downstream 5000   false chr8: 34170995-34175994 Medicago truncatula
Medtr8g079690 10.0kb upstream 10.0kb upstream 14509   true chr8: 34156486-34170994 Medicago truncatula
Medtr8g079690 10.0kb upstream 10.0kb upstream 10000   false chr8: 34156486-34166485 Medicago truncatula
Medtr8g079690 10.0kb downstream 10.0kb downstream 14509   true chr8: 34166486-34180994 Medicago truncatula
Medtr8g079690 10.0kb downstream 10.0kb downstream 10000   false chr8: 34170995-34180994 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305528 5265 Fabidae View MSA
124069399 5270 Rosid View MSA
123742275 5271 Pentapetalae View MSA
122795031 5272 Eudicot View MSA
122048372 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121348447 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.383        
cufflinks 1.107        
cufflinks 0.985        
cufflinks 0.751        
cufflinks 1.87        
cufflinks 0.29       Low
cufflinks 1.698        
cufflinks 1.146        
cufflinks 2.569       High

0 Strain