Gene : Medtr8g079680 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF01386 - Ribosomal L25p family (Ribosomal_L25p) Description:  50S ribosomal protein L25, putative
Genomic Order:  4171 Name:  ? Medtr8g079680
Secondary Identifier:  ? PAC:31070348
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g079680 0.5kb upstream 0.5kb upstream 4640   true chr8: 34160821-34165460 Medicago truncatula
Medtr8g079680 0.5kb upstream 0.5kb upstream 500   false chr8: 34160821-34161320 Medicago truncatula
Medtr8g079680 0.5kb downstream 0.5kb downstream 4640   true chr8: 34161321-34165960 Medicago truncatula
Medtr8g079680 0.5kb downstream 0.5kb downstream 500   false chr8: 34165461-34165960 Medicago truncatula
Medtr8g079680 1.0kb upstream 1.0kb upstream 5140   true chr8: 34160321-34165460 Medicago truncatula
Medtr8g079680 1.0kb upstream 1.0kb upstream 1000   false chr8: 34160321-34161320 Medicago truncatula
Medtr8g079680 1.0kb downstream 1.0kb downstream 5140   true chr8: 34161321-34166460 Medicago truncatula
Medtr8g079680 1.0kb downstream 1.0kb downstream 1000   false chr8: 34165461-34166460 Medicago truncatula
Medtr8g079680 2.0kb upstream 2.0kb upstream 6140   true chr8: 34159321-34165460 Medicago truncatula
Medtr8g079680 2.0kb upstream 2.0kb upstream 2000   false chr8: 34159321-34161320 Medicago truncatula
Medtr8g079680 2.0kb downstream 2.0kb downstream 6140   true chr8: 34161321-34167460 Medicago truncatula
Medtr8g079680 2.0kb downstream 2.0kb downstream 2000   false chr8: 34165461-34167460 Medicago truncatula
Medtr8g079680 5.0kb upstream 5.0kb upstream 9140   true chr8: 34156321-34165460 Medicago truncatula
Medtr8g079680 5.0kb upstream 5.0kb upstream 5000   false chr8: 34156321-34161320 Medicago truncatula
Medtr8g079680 5.0kb downstream 5.0kb downstream 9140   true chr8: 34161321-34170460 Medicago truncatula
Medtr8g079680 5.0kb downstream 5.0kb downstream 5000   false chr8: 34165461-34170460 Medicago truncatula
Medtr8g079680 10.0kb upstream 10.0kb upstream 14140   true chr8: 34151321-34165460 Medicago truncatula
Medtr8g079680 10.0kb upstream 10.0kb upstream 10000   false chr8: 34151321-34161320 Medicago truncatula
Medtr8g079680 10.0kb downstream 10.0kb downstream 14140   true chr8: 34161321-34175460 Medicago truncatula
Medtr8g079680 10.0kb downstream 10.0kb downstream 10000   false chr8: 34165461-34175460 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304128 5265 Fabidae View MSA
124065832 5270 Rosid View MSA
123736530 5271 Pentapetalae View MSA
122787810 5272 Eudicot View MSA
122043085 5273 Angiosperm View MSA
121310072 5274 Embryophyte View MSA
123426023 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.007        
cufflinks 2.852       Low
cufflinks 3.707        
cufflinks 4.957        
cufflinks 5.572       High
cufflinks 3.514        
cufflinks 4.256        
cufflinks 3.221        
cufflinks 5.609       High

0 Strain