Gene : Medtr8g079890 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22536 - LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN Description:  hypothetical protein
Genomic Order:  4185 Name:  ? Medtr8g079890
Secondary Identifier:  ? PAC:31071681
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g079890 0.5kb upstream 0.5kb upstream 4439   true chr8: 34283126-34287564 Medicago truncatula
Medtr8g079890 0.5kb upstream 0.5kb upstream 500   false chr8: 34287065-34287564 Medicago truncatula
Medtr8g079890 0.5kb downstream 0.5kb downstream 4439   true chr8: 34282626-34287064 Medicago truncatula
Medtr8g079890 0.5kb downstream 0.5kb downstream 500   false chr8: 34282626-34283125 Medicago truncatula
Medtr8g079890 1.0kb upstream 1.0kb upstream 4939   true chr8: 34283126-34288064 Medicago truncatula
Medtr8g079890 1.0kb upstream 1.0kb upstream 1000   false chr8: 34287065-34288064 Medicago truncatula
Medtr8g079890 1.0kb downstream 1.0kb downstream 4939   true chr8: 34282126-34287064 Medicago truncatula
Medtr8g079890 1.0kb downstream 1.0kb downstream 1000   false chr8: 34282126-34283125 Medicago truncatula
Medtr8g079890 2.0kb upstream 2.0kb upstream 5939   true chr8: 34283126-34289064 Medicago truncatula
Medtr8g079890 2.0kb upstream 2.0kb upstream 2000   false chr8: 34287065-34289064 Medicago truncatula
Medtr8g079890 2.0kb downstream 2.0kb downstream 5939   true chr8: 34281126-34287064 Medicago truncatula
Medtr8g079890 2.0kb downstream 2.0kb downstream 2000   false chr8: 34281126-34283125 Medicago truncatula
Medtr8g079890 5.0kb upstream 5.0kb upstream 8939   true chr8: 34283126-34292064 Medicago truncatula
Medtr8g079890 5.0kb upstream 5.0kb upstream 5000   false chr8: 34287065-34292064 Medicago truncatula
Medtr8g079890 5.0kb downstream 5.0kb downstream 8939   true chr8: 34278126-34287064 Medicago truncatula
Medtr8g079890 5.0kb downstream 5.0kb downstream 5000   false chr8: 34278126-34283125 Medicago truncatula
Medtr8g079890 10.0kb upstream 10.0kb upstream 13939   true chr8: 34283126-34297064 Medicago truncatula
Medtr8g079890 10.0kb upstream 10.0kb upstream 10000   false chr8: 34287065-34297064 Medicago truncatula
Medtr8g079890 10.0kb downstream 10.0kb downstream 13939   true chr8: 34273126-34287064 Medicago truncatula
Medtr8g079890 10.0kb downstream 10.0kb downstream 10000   false chr8: 34273126-34283125 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296715 5265 Fabidae View MSA
124074053 5270 Rosid View MSA
123743720 5271 Pentapetalae View MSA
122789289 5272 Eudicot View MSA
122041858 5273 Angiosperm View MSA
121345817 5274 Embryophyte View MSA
123425736 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.813        
cufflinks 1.974        
cufflinks 1.911        
cufflinks 0.848       Low
cufflinks 2.613       High
cufflinks 0.736       Low
cufflinks 2.523        
cufflinks 1.751        
cufflinks 1.62        

0 Strain