Gene : Medtr8g079820 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG0292 - Vesicle coat complex COPI, alpha subunit Description:  transducin/WD40 repeat protein
Genomic Order:  4182 Name:  ? Medtr8g079820
Secondary Identifier:  ? PAC:31070876
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g079820 0.5kb upstream 0.5kb upstream 18997   true chr8: 34234779-34253775 Medicago truncatula
Medtr8g079820 0.5kb upstream 0.5kb upstream 500   false chr8: 34234779-34235278 Medicago truncatula
Medtr8g079820 0.5kb downstream 0.5kb downstream 18997   true chr8: 34235279-34254275 Medicago truncatula
Medtr8g079820 0.5kb downstream 0.5kb downstream 500   false chr8: 34253776-34254275 Medicago truncatula
Medtr8g079820 1.0kb upstream 1.0kb upstream 19497   true chr8: 34234279-34253775 Medicago truncatula
Medtr8g079820 1.0kb upstream 1.0kb upstream 1000   false chr8: 34234279-34235278 Medicago truncatula
Medtr8g079820 1.0kb downstream 1.0kb downstream 19497   true chr8: 34235279-34254775 Medicago truncatula
Medtr8g079820 1.0kb downstream 1.0kb downstream 1000   false chr8: 34253776-34254775 Medicago truncatula
Medtr8g079820 2.0kb upstream 2.0kb upstream 20497   true chr8: 34233279-34253775 Medicago truncatula
Medtr8g079820 2.0kb upstream 2.0kb upstream 2000   false chr8: 34233279-34235278 Medicago truncatula
Medtr8g079820 2.0kb downstream 2.0kb downstream 20497   true chr8: 34235279-34255775 Medicago truncatula
Medtr8g079820 2.0kb downstream 2.0kb downstream 2000   false chr8: 34253776-34255775 Medicago truncatula
Medtr8g079820 5.0kb upstream 5.0kb upstream 23497   true chr8: 34230279-34253775 Medicago truncatula
Medtr8g079820 5.0kb upstream 5.0kb upstream 5000   false chr8: 34230279-34235278 Medicago truncatula
Medtr8g079820 5.0kb downstream 5.0kb downstream 23497   true chr8: 34235279-34258775 Medicago truncatula
Medtr8g079820 5.0kb downstream 5.0kb downstream 5000   false chr8: 34253776-34258775 Medicago truncatula
Medtr8g079820 10.0kb upstream 10.0kb upstream 28497   true chr8: 34225279-34253775 Medicago truncatula
Medtr8g079820 10.0kb upstream 10.0kb upstream 10000   false chr8: 34225279-34235278 Medicago truncatula
Medtr8g079820 10.0kb downstream 10.0kb downstream 28497   true chr8: 34235279-34263775 Medicago truncatula
Medtr8g079820 10.0kb downstream 10.0kb downstream 10000   false chr8: 34253776-34263775 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305662 5265 Fabidae View MSA
124050225 5270 Rosid View MSA
123737752 5271 Pentapetalae View MSA
122788494 5272 Eudicot View MSA
122042112 5273 Angiosperm View MSA
121345827 5274 Embryophyte View MSA
123428290 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.22        
cufflinks 6.844        
cufflinks 6.48        
cufflinks 2.079       Low
cufflinks 7.055        
cufflinks 1.523       Low
cufflinks 4.482        
cufflinks 6.061        
cufflinks 5.607        

0 Strain