Gene : Medtr8g080750 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15601 - STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4 Description:  viral movement protein
Genomic Order:  4245 Name:  ? Medtr8g080750
Secondary Identifier:  ? PAC:31074623
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g080750 0.5kb upstream 0.5kb upstream 3127   true chr8: 34756153-34759279 Medicago truncatula
Medtr8g080750 0.5kb upstream 0.5kb upstream 500   false chr8: 34758780-34759279 Medicago truncatula
Medtr8g080750 0.5kb downstream 0.5kb downstream 3127   true chr8: 34755653-34758779 Medicago truncatula
Medtr8g080750 0.5kb downstream 0.5kb downstream 500   false chr8: 34755653-34756152 Medicago truncatula
Medtr8g080750 1.0kb upstream 1.0kb upstream 3627   true chr8: 34756153-34759779 Medicago truncatula
Medtr8g080750 1.0kb upstream 1.0kb upstream 1000   false chr8: 34758780-34759779 Medicago truncatula
Medtr8g080750 1.0kb downstream 1.0kb downstream 3627   true chr8: 34755153-34758779 Medicago truncatula
Medtr8g080750 1.0kb downstream 1.0kb downstream 1000   false chr8: 34755153-34756152 Medicago truncatula
Medtr8g080750 2.0kb upstream 2.0kb upstream 4627   true chr8: 34756153-34760779 Medicago truncatula
Medtr8g080750 2.0kb upstream 2.0kb upstream 2000   false chr8: 34758780-34760779 Medicago truncatula
Medtr8g080750 2.0kb downstream 2.0kb downstream 4627   true chr8: 34754153-34758779 Medicago truncatula
Medtr8g080750 2.0kb downstream 2.0kb downstream 2000   false chr8: 34754153-34756152 Medicago truncatula
Medtr8g080750 5.0kb upstream 5.0kb upstream 7627   true chr8: 34756153-34763779 Medicago truncatula
Medtr8g080750 5.0kb upstream 5.0kb upstream 5000   false chr8: 34758780-34763779 Medicago truncatula
Medtr8g080750 5.0kb downstream 5.0kb downstream 7627   true chr8: 34751153-34758779 Medicago truncatula
Medtr8g080750 5.0kb downstream 5.0kb downstream 5000   false chr8: 34751153-34756152 Medicago truncatula
Medtr8g080750 10.0kb upstream 10.0kb upstream 12627   true chr8: 34756153-34768779 Medicago truncatula
Medtr8g080750 10.0kb upstream 10.0kb upstream 10000   false chr8: 34758780-34768779 Medicago truncatula
Medtr8g080750 10.0kb downstream 10.0kb downstream 12627   true chr8: 34746153-34758779 Medicago truncatula
Medtr8g080750 10.0kb downstream 10.0kb downstream 10000   false chr8: 34746153-34756152 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122288761 5265 Fabidae View MSA
124028953 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 99.732     High  
cufflinks 20.347     High  
cufflinks 25.046     High  
cufflinks 271.722     High High
cufflinks 19.951     High Low
cufflinks 372.492     High High
cufflinks 97.189     High  
cufflinks 19.599     High Low
cufflinks 100.737     High  

0 Strain