Gene : Medtr8g080570 M. truncatula Mt4.0v1
Defline:  (1 of 6) PF05755 - Rubber elongation factor protein (REF) (REF) Description:  rubber elongation factor protein
Genomic Order:  4235 Name:  ? Medtr8g080570
Secondary Identifier:  ? PAC:31074621
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g080570 0.5kb upstream 0.5kb upstream 2646   true chr8: 34649376-34652021 Medicago truncatula
Medtr8g080570 0.5kb upstream 0.5kb upstream 500   false chr8: 34649376-34649875 Medicago truncatula
Medtr8g080570 0.5kb downstream 0.5kb downstream 2646   true chr8: 34649876-34652521 Medicago truncatula
Medtr8g080570 0.5kb downstream 0.5kb downstream 500   false chr8: 34652022-34652521 Medicago truncatula
Medtr8g080570 1.0kb upstream 1.0kb upstream 3146   true chr8: 34648876-34652021 Medicago truncatula
Medtr8g080570 1.0kb upstream 1.0kb upstream 1000   false chr8: 34648876-34649875 Medicago truncatula
Medtr8g080570 1.0kb downstream 1.0kb downstream 3146   true chr8: 34649876-34653021 Medicago truncatula
Medtr8g080570 1.0kb downstream 1.0kb downstream 1000   false chr8: 34652022-34653021 Medicago truncatula
Medtr8g080570 2.0kb upstream 2.0kb upstream 4146   true chr8: 34647876-34652021 Medicago truncatula
Medtr8g080570 2.0kb upstream 2.0kb upstream 2000   false chr8: 34647876-34649875 Medicago truncatula
Medtr8g080570 2.0kb downstream 2.0kb downstream 4146   true chr8: 34649876-34654021 Medicago truncatula
Medtr8g080570 2.0kb downstream 2.0kb downstream 2000   false chr8: 34652022-34654021 Medicago truncatula
Medtr8g080570 5.0kb upstream 5.0kb upstream 7146   true chr8: 34644876-34652021 Medicago truncatula
Medtr8g080570 5.0kb upstream 5.0kb upstream 5000   false chr8: 34644876-34649875 Medicago truncatula
Medtr8g080570 5.0kb downstream 5.0kb downstream 7146   true chr8: 34649876-34657021 Medicago truncatula
Medtr8g080570 5.0kb downstream 5.0kb downstream 5000   false chr8: 34652022-34657021 Medicago truncatula
Medtr8g080570 10.0kb upstream 10.0kb upstream 12146   true chr8: 34639876-34652021 Medicago truncatula
Medtr8g080570 10.0kb upstream 10.0kb upstream 10000   false chr8: 34639876-34649875 Medicago truncatula
Medtr8g080570 10.0kb downstream 10.0kb downstream 12146   true chr8: 34649876-34662021 Medicago truncatula
Medtr8g080570 10.0kb downstream 10.0kb downstream 10000   false chr8: 34652022-34662021 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311567 5265 Fabidae View MSA
124068365 5270 Rosid View MSA
123736547 5271 Pentapetalae View MSA
122769867 5272 Eudicot View MSA
122050006 5273 Angiosperm View MSA
121311681 5274 Embryophyte View MSA
123348946 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low Low
cufflinks 0.337        
cufflinks 0.562        
cufflinks 0.515        
cufflinks 0.434        
cufflinks 0.114     Low  
cufflinks 2.496       High
cufflinks 0.463        
cufflinks 4.492       High

0 Strain