Gene : Medtr8g081000 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13068:SF18 - EMB Description:  transcription termination factor family protein
Genomic Order:  4282 Name:  ? Medtr8g081000
Secondary Identifier:  ? PAC:31070808
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g081000 0.5kb upstream 0.5kb upstream 3362   true chr8: 34982125-34985486 Medicago truncatula
Medtr8g081000 0.5kb upstream 0.5kb upstream 500   false chr8: 34984987-34985486 Medicago truncatula
Medtr8g081000 0.5kb downstream 0.5kb downstream 3362   true chr8: 34981625-34984986 Medicago truncatula
Medtr8g081000 0.5kb downstream 0.5kb downstream 500   false chr8: 34981625-34982124 Medicago truncatula
Medtr8g081000 1.0kb upstream 1.0kb upstream 3862   true chr8: 34982125-34985986 Medicago truncatula
Medtr8g081000 1.0kb upstream 1.0kb upstream 1000   false chr8: 34984987-34985986 Medicago truncatula
Medtr8g081000 1.0kb downstream 1.0kb downstream 3862   true chr8: 34981125-34984986 Medicago truncatula
Medtr8g081000 1.0kb downstream 1.0kb downstream 1000   false chr8: 34981125-34982124 Medicago truncatula
Medtr8g081000 2.0kb upstream 2.0kb upstream 4862   true chr8: 34982125-34986986 Medicago truncatula
Medtr8g081000 2.0kb upstream 2.0kb upstream 2000   false chr8: 34984987-34986986 Medicago truncatula
Medtr8g081000 2.0kb downstream 2.0kb downstream 4862   true chr8: 34980125-34984986 Medicago truncatula
Medtr8g081000 2.0kb downstream 2.0kb downstream 2000   false chr8: 34980125-34982124 Medicago truncatula
Medtr8g081000 5.0kb upstream 5.0kb upstream 7862   true chr8: 34982125-34989986 Medicago truncatula
Medtr8g081000 5.0kb upstream 5.0kb upstream 5000   false chr8: 34984987-34989986 Medicago truncatula
Medtr8g081000 5.0kb downstream 5.0kb downstream 7862   true chr8: 34977125-34984986 Medicago truncatula
Medtr8g081000 5.0kb downstream 5.0kb downstream 5000   false chr8: 34977125-34982124 Medicago truncatula
Medtr8g081000 10.0kb upstream 10.0kb upstream 12862   true chr8: 34982125-34994986 Medicago truncatula
Medtr8g081000 10.0kb upstream 10.0kb upstream 10000   false chr8: 34984987-34994986 Medicago truncatula
Medtr8g081000 10.0kb downstream 10.0kb downstream 12862   true chr8: 34972125-34984986 Medicago truncatula
Medtr8g081000 10.0kb downstream 10.0kb downstream 10000   false chr8: 34972125-34982124 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314347 5265 Fabidae View MSA
124073923 5270 Rosid View MSA
123752887 5271 Pentapetalae View MSA
122796698 5272 Eudicot View MSA
122050390 5273 Angiosperm View MSA
121351168 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.378        
cufflinks 0.186        
cufflinks 0.398        
cufflinks 0.255        
cufflinks 0.556       High
cufflinks 0.042     Low Low
cufflinks 0.269        
cufflinks 0.274        
cufflinks 0.219        

0 Strain