Gene : Medtr8g080990 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13068:SF18 - EMB Description:  transcription termination factor family protein
Genomic Order:  4281 Name:  ? Medtr8g080990
Secondary Identifier:  ? PAC:31076271
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g080990 0.5kb upstream 0.5kb upstream 2556   true chr8: 34978858-34981413 Medicago truncatula
Medtr8g080990 0.5kb upstream 0.5kb upstream 500   false chr8: 34980914-34981413 Medicago truncatula
Medtr8g080990 0.5kb downstream 0.5kb downstream 2556   true chr8: 34978358-34980913 Medicago truncatula
Medtr8g080990 0.5kb downstream 0.5kb downstream 500   false chr8: 34978358-34978857 Medicago truncatula
Medtr8g080990 1.0kb upstream 1.0kb upstream 3056   true chr8: 34978858-34981913 Medicago truncatula
Medtr8g080990 1.0kb upstream 1.0kb upstream 1000   false chr8: 34980914-34981913 Medicago truncatula
Medtr8g080990 1.0kb downstream 1.0kb downstream 3056   true chr8: 34977858-34980913 Medicago truncatula
Medtr8g080990 1.0kb downstream 1.0kb downstream 1000   false chr8: 34977858-34978857 Medicago truncatula
Medtr8g080990 2.0kb upstream 2.0kb upstream 4056   true chr8: 34978858-34982913 Medicago truncatula
Medtr8g080990 2.0kb upstream 2.0kb upstream 2000   false chr8: 34980914-34982913 Medicago truncatula
Medtr8g080990 2.0kb downstream 2.0kb downstream 4056   true chr8: 34976858-34980913 Medicago truncatula
Medtr8g080990 2.0kb downstream 2.0kb downstream 2000   false chr8: 34976858-34978857 Medicago truncatula
Medtr8g080990 5.0kb upstream 5.0kb upstream 7056   true chr8: 34978858-34985913 Medicago truncatula
Medtr8g080990 5.0kb upstream 5.0kb upstream 5000   false chr8: 34980914-34985913 Medicago truncatula
Medtr8g080990 5.0kb downstream 5.0kb downstream 7056   true chr8: 34973858-34980913 Medicago truncatula
Medtr8g080990 5.0kb downstream 5.0kb downstream 5000   false chr8: 34973858-34978857 Medicago truncatula
Medtr8g080990 10.0kb upstream 10.0kb upstream 12056   true chr8: 34978858-34990913 Medicago truncatula
Medtr8g080990 10.0kb upstream 10.0kb upstream 10000   false chr8: 34980914-34990913 Medicago truncatula
Medtr8g080990 10.0kb downstream 10.0kb downstream 12056   true chr8: 34968858-34980913 Medicago truncatula
Medtr8g080990 10.0kb downstream 10.0kb downstream 10000   false chr8: 34968858-34978857 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314347 5265 Fabidae View MSA
124073923 5270 Rosid View MSA
123752887 5271 Pentapetalae View MSA
122796698 5272 Eudicot View MSA
122050390 5273 Angiosperm View MSA
121351168 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.38        
cufflinks 0.805        
cufflinks 1.378        
cufflinks 0.804        
cufflinks 2.774       High
cufflinks 0.059     Low Low
cufflinks 1.156        
cufflinks 0.887        
cufflinks 1.093        

0 Strain