Gene : Medtr8g085300 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22957//PTHR22957:SF329 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Description:  RabGAP/TBC domain protein
Genomic Order:  4330 Name:  ? Medtr8g085300
Secondary Identifier:  ? PAC:31070587
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g085300 0.5kb upstream 0.5kb upstream 4943   true chr8: 35330009-35334951 Medicago truncatula
Medtr8g085300 0.5kb upstream 0.5kb upstream 500   false chr8: 35334452-35334951 Medicago truncatula
Medtr8g085300 0.5kb downstream 0.5kb downstream 4943   true chr8: 35329509-35334451 Medicago truncatula
Medtr8g085300 0.5kb downstream 0.5kb downstream 500   false chr8: 35329509-35330008 Medicago truncatula
Medtr8g085300 1.0kb upstream 1.0kb upstream 5443   true chr8: 35330009-35335451 Medicago truncatula
Medtr8g085300 1.0kb upstream 1.0kb upstream 1000   false chr8: 35334452-35335451 Medicago truncatula
Medtr8g085300 1.0kb downstream 1.0kb downstream 5443   true chr8: 35329009-35334451 Medicago truncatula
Medtr8g085300 1.0kb downstream 1.0kb downstream 1000   false chr8: 35329009-35330008 Medicago truncatula
Medtr8g085300 2.0kb upstream 2.0kb upstream 6443   true chr8: 35330009-35336451 Medicago truncatula
Medtr8g085300 2.0kb upstream 2.0kb upstream 2000   false chr8: 35334452-35336451 Medicago truncatula
Medtr8g085300 2.0kb downstream 2.0kb downstream 6443   true chr8: 35328009-35334451 Medicago truncatula
Medtr8g085300 2.0kb downstream 2.0kb downstream 2000   false chr8: 35328009-35330008 Medicago truncatula
Medtr8g085300 5.0kb upstream 5.0kb upstream 9443   true chr8: 35330009-35339451 Medicago truncatula
Medtr8g085300 5.0kb upstream 5.0kb upstream 5000   false chr8: 35334452-35339451 Medicago truncatula
Medtr8g085300 5.0kb downstream 5.0kb downstream 9443   true chr8: 35325009-35334451 Medicago truncatula
Medtr8g085300 5.0kb downstream 5.0kb downstream 5000   false chr8: 35325009-35330008 Medicago truncatula
Medtr8g085300 10.0kb upstream 10.0kb upstream 14443   true chr8: 35330009-35344451 Medicago truncatula
Medtr8g085300 10.0kb upstream 10.0kb upstream 10000   false chr8: 35334452-35344451 Medicago truncatula
Medtr8g085300 10.0kb downstream 10.0kb downstream 14443   true chr8: 35320009-35334451 Medicago truncatula
Medtr8g085300 10.0kb downstream 10.0kb downstream 10000   false chr8: 35320009-35330008 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301708 5265 Fabidae View MSA
124070393 5270 Rosid View MSA
123742752 5271 Pentapetalae View MSA
122794560 5272 Eudicot View MSA
122050353 5273 Angiosperm View MSA
121347647 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.457       Low
cufflinks 2.022        
cufflinks 2.272        
cufflinks 2.515        
cufflinks 2.391        
cufflinks 1.109       Low
cufflinks 2.468        
cufflinks 1.9        
cufflinks 2.552        

0 Strain