Gene : Medtr8g085900 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31250:SF4 - CALMODULIN-BINDING FAMILY PROTEIN-RELATED Description:  calmodulin-binding family protein
Genomic Order:  4379 Name:  ? Medtr8g085900
Secondary Identifier:  ? PAC:31075266
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g085900 0.5kb upstream 0.5kb upstream 4189   true chr8: 35620952-35625140 Medicago truncatula
Medtr8g085900 0.5kb upstream 0.5kb upstream 500   false chr8: 35624641-35625140 Medicago truncatula
Medtr8g085900 0.5kb downstream 0.5kb downstream 4189   true chr8: 35620452-35624640 Medicago truncatula
Medtr8g085900 0.5kb downstream 0.5kb downstream 500   false chr8: 35620452-35620951 Medicago truncatula
Medtr8g085900 1.0kb upstream 1.0kb upstream 4689   true chr8: 35620952-35625640 Medicago truncatula
Medtr8g085900 1.0kb upstream 1.0kb upstream 1000   false chr8: 35624641-35625640 Medicago truncatula
Medtr8g085900 1.0kb downstream 1.0kb downstream 4689   true chr8: 35619952-35624640 Medicago truncatula
Medtr8g085900 1.0kb downstream 1.0kb downstream 1000   false chr8: 35619952-35620951 Medicago truncatula
Medtr8g085900 2.0kb upstream 2.0kb upstream 5689   true chr8: 35620952-35626640 Medicago truncatula
Medtr8g085900 2.0kb upstream 2.0kb upstream 2000   false chr8: 35624641-35626640 Medicago truncatula
Medtr8g085900 2.0kb downstream 2.0kb downstream 5689   true chr8: 35618952-35624640 Medicago truncatula
Medtr8g085900 2.0kb downstream 2.0kb downstream 2000   false chr8: 35618952-35620951 Medicago truncatula
Medtr8g085900 5.0kb upstream 5.0kb upstream 8689   true chr8: 35620952-35629640 Medicago truncatula
Medtr8g085900 5.0kb upstream 5.0kb upstream 5000   false chr8: 35624641-35629640 Medicago truncatula
Medtr8g085900 5.0kb downstream 5.0kb downstream 8689   true chr8: 35615952-35624640 Medicago truncatula
Medtr8g085900 5.0kb downstream 5.0kb downstream 5000   false chr8: 35615952-35620951 Medicago truncatula
Medtr8g085900 10.0kb upstream 10.0kb upstream 13689   true chr8: 35620952-35634640 Medicago truncatula
Medtr8g085900 10.0kb upstream 10.0kb upstream 10000   false chr8: 35624641-35634640 Medicago truncatula
Medtr8g085900 10.0kb downstream 10.0kb downstream 13689   true chr8: 35610952-35624640 Medicago truncatula
Medtr8g085900 10.0kb downstream 10.0kb downstream 10000   false chr8: 35610952-35620951 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300580 5265 Fabidae View MSA
124062345 5270 Rosid View MSA
123742026 5271 Pentapetalae View MSA
122795644 5272 Eudicot View MSA
122045965 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.785        
cufflinks 0.337        
cufflinks 0.311        
cufflinks 1.277        
cufflinks 0.183       Low
cufflinks 4.132        
cufflinks 11.357     High High
cufflinks 0.333        
cufflinks 13.289     High High

0 Strain