Gene : Medtr8g086520 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11119//PTHR11119:SF47 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER Description:  nucleobase-ascorbate transporter-like protein
Genomic Order:  4421 Name:  ? Medtr8g086520
Secondary Identifier:  ? PAC:31074923
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g086520 0.5kb upstream 0.5kb upstream 4896   true chr8: 35893600-35898495 Medicago truncatula
Medtr8g086520 0.5kb upstream 0.5kb upstream 500   false chr8: 35893600-35894099 Medicago truncatula
Medtr8g086520 0.5kb downstream 0.5kb downstream 4896   true chr8: 35894100-35898995 Medicago truncatula
Medtr8g086520 0.5kb downstream 0.5kb downstream 500   false chr8: 35898496-35898995 Medicago truncatula
Medtr8g086520 1.0kb upstream 1.0kb upstream 5396   true chr8: 35893100-35898495 Medicago truncatula
Medtr8g086520 1.0kb upstream 1.0kb upstream 1000   false chr8: 35893100-35894099 Medicago truncatula
Medtr8g086520 1.0kb downstream 1.0kb downstream 5396   true chr8: 35894100-35899495 Medicago truncatula
Medtr8g086520 1.0kb downstream 1.0kb downstream 1000   false chr8: 35898496-35899495 Medicago truncatula
Medtr8g086520 2.0kb upstream 2.0kb upstream 6396   true chr8: 35892100-35898495 Medicago truncatula
Medtr8g086520 2.0kb upstream 2.0kb upstream 2000   false chr8: 35892100-35894099 Medicago truncatula
Medtr8g086520 2.0kb downstream 2.0kb downstream 6396   true chr8: 35894100-35900495 Medicago truncatula
Medtr8g086520 2.0kb downstream 2.0kb downstream 2000   false chr8: 35898496-35900495 Medicago truncatula
Medtr8g086520 5.0kb upstream 5.0kb upstream 9396   true chr8: 35889100-35898495 Medicago truncatula
Medtr8g086520 5.0kb upstream 5.0kb upstream 5000   false chr8: 35889100-35894099 Medicago truncatula
Medtr8g086520 5.0kb downstream 5.0kb downstream 9396   true chr8: 35894100-35903495 Medicago truncatula
Medtr8g086520 5.0kb downstream 5.0kb downstream 5000   false chr8: 35898496-35903495 Medicago truncatula
Medtr8g086520 10.0kb upstream 10.0kb upstream 14396   true chr8: 35884100-35898495 Medicago truncatula
Medtr8g086520 10.0kb upstream 10.0kb upstream 10000   false chr8: 35884100-35894099 Medicago truncatula
Medtr8g086520 10.0kb downstream 10.0kb downstream 14396   true chr8: 35894100-35908495 Medicago truncatula
Medtr8g086520 10.0kb downstream 10.0kb downstream 10000   false chr8: 35898496-35908495 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305501 5265 Fabidae View MSA
124067921 5270 Rosid View MSA
123749594 5271 Pentapetalae View MSA
122792857 5272 Eudicot View MSA
122044330 5273 Angiosperm View MSA
121348988 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.393       High
cufflinks 0.691        
cufflinks 0.347       Low
cufflinks 0.894        
cufflinks 0.476        
cufflinks 0.247       Low
cufflinks 0.979        
cufflinks 0.697        
cufflinks 0.63        

0 Strain