Gene : Medtr8g086470 M. truncatula Mt4.0v1
Defline:  (1 of 3) 3.4.22.67 - Zingipain / Zingibain Description:  papain family cysteine protease
Genomic Order:  4418 Name:  ? Medtr8g086470
Secondary Identifier:  ? PAC:31072299
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g086470 0.5kb upstream 0.5kb upstream 2236   true chr8: 35874843-35877078 Medicago truncatula
Medtr8g086470 0.5kb upstream 0.5kb upstream 500   false chr8: 35874843-35875342 Medicago truncatula
Medtr8g086470 0.5kb downstream 0.5kb downstream 2236   true chr8: 35875343-35877578 Medicago truncatula
Medtr8g086470 0.5kb downstream 0.5kb downstream 500   false chr8: 35877079-35877578 Medicago truncatula
Medtr8g086470 1.0kb upstream 1.0kb upstream 2736   true chr8: 35874343-35877078 Medicago truncatula
Medtr8g086470 1.0kb upstream 1.0kb upstream 1000   false chr8: 35874343-35875342 Medicago truncatula
Medtr8g086470 1.0kb downstream 1.0kb downstream 2736   true chr8: 35875343-35878078 Medicago truncatula
Medtr8g086470 1.0kb downstream 1.0kb downstream 1000   false chr8: 35877079-35878078 Medicago truncatula
Medtr8g086470 2.0kb upstream 2.0kb upstream 3736   true chr8: 35873343-35877078 Medicago truncatula
Medtr8g086470 2.0kb upstream 2.0kb upstream 2000   false chr8: 35873343-35875342 Medicago truncatula
Medtr8g086470 2.0kb downstream 2.0kb downstream 3736   true chr8: 35875343-35879078 Medicago truncatula
Medtr8g086470 2.0kb downstream 2.0kb downstream 2000   false chr8: 35877079-35879078 Medicago truncatula
Medtr8g086470 5.0kb upstream 5.0kb upstream 6736   true chr8: 35870343-35877078 Medicago truncatula
Medtr8g086470 5.0kb upstream 5.0kb upstream 5000   false chr8: 35870343-35875342 Medicago truncatula
Medtr8g086470 5.0kb downstream 5.0kb downstream 6736   true chr8: 35875343-35882078 Medicago truncatula
Medtr8g086470 5.0kb downstream 5.0kb downstream 5000   false chr8: 35877079-35882078 Medicago truncatula
Medtr8g086470 10.0kb upstream 10.0kb upstream 11736   true chr8: 35865343-35877078 Medicago truncatula
Medtr8g086470 10.0kb upstream 10.0kb upstream 10000   false chr8: 35865343-35875342 Medicago truncatula
Medtr8g086470 10.0kb downstream 10.0kb downstream 11736   true chr8: 35875343-35887078 Medicago truncatula
Medtr8g086470 10.0kb downstream 10.0kb downstream 10000   false chr8: 35877079-35887078 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780807 5273 Angiosperm View MSA
122296443 5265 Fabidae View MSA
124035647 5270 Rosid View MSA
123747945 5271 Pentapetalae View MSA
122772367 5272 Eudicot View MSA
121052407 5274 Embryophyte View MSA
123092456 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.006     Low  
cufflinks 0.021     Low High

0 Strain