Gene : Medtr8g087530 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33057:SF10 - OVATE FAMILY PROTEIN 5 Description:  ovate transcriptional repressor
Genomic Order:  4462 Name:  ? Medtr8g087530
Secondary Identifier:  ? PAC:31070603
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g087530 0.5kb upstream 0.5kb upstream 1520   true chr8: 36169612-36171131 Medicago truncatula
Medtr8g087530 0.5kb upstream 0.5kb upstream 500   false chr8: 36169612-36170111 Medicago truncatula
Medtr8g087530 0.5kb downstream 0.5kb downstream 1520   true chr8: 36170112-36171631 Medicago truncatula
Medtr8g087530 0.5kb downstream 0.5kb downstream 500   false chr8: 36171132-36171631 Medicago truncatula
Medtr8g087530 1.0kb upstream 1.0kb upstream 2020   true chr8: 36169112-36171131 Medicago truncatula
Medtr8g087530 1.0kb upstream 1.0kb upstream 1000   false chr8: 36169112-36170111 Medicago truncatula
Medtr8g087530 1.0kb downstream 1.0kb downstream 2020   true chr8: 36170112-36172131 Medicago truncatula
Medtr8g087530 1.0kb downstream 1.0kb downstream 1000   false chr8: 36171132-36172131 Medicago truncatula
Medtr8g087530 2.0kb upstream 2.0kb upstream 3020   true chr8: 36168112-36171131 Medicago truncatula
Medtr8g087530 2.0kb upstream 2.0kb upstream 2000   false chr8: 36168112-36170111 Medicago truncatula
Medtr8g087530 2.0kb downstream 2.0kb downstream 3020   true chr8: 36170112-36173131 Medicago truncatula
Medtr8g087530 2.0kb downstream 2.0kb downstream 2000   false chr8: 36171132-36173131 Medicago truncatula
Medtr8g087530 5.0kb upstream 5.0kb upstream 6020   true chr8: 36165112-36171131 Medicago truncatula
Medtr8g087530 5.0kb upstream 5.0kb upstream 5000   false chr8: 36165112-36170111 Medicago truncatula
Medtr8g087530 5.0kb downstream 5.0kb downstream 6020   true chr8: 36170112-36176131 Medicago truncatula
Medtr8g087530 5.0kb downstream 5.0kb downstream 5000   false chr8: 36171132-36176131 Medicago truncatula
Medtr8g087530 10.0kb upstream 10.0kb upstream 11020   true chr8: 36160112-36171131 Medicago truncatula
Medtr8g087530 10.0kb upstream 10.0kb upstream 10000   false chr8: 36160112-36170111 Medicago truncatula
Medtr8g087530 10.0kb downstream 10.0kb downstream 11020   true chr8: 36170112-36181131 Medicago truncatula
Medtr8g087530 10.0kb downstream 10.0kb downstream 10000   false chr8: 36171132-36181131 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305616 5265 Fabidae View MSA
124050737 5270 Rosid View MSA
123750394 5271 Pentapetalae View MSA
122789866 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.243       High
cufflinks 0.076        
cufflinks 0.155        
cufflinks 0.024     Low Low
cufflinks 0.103        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.098        
cufflinks 0.062     Low  
cufflinks 0.036     Low Low

0 Strain