Gene : Medtr8g086820 M. truncatula Mt4.0v1
Defline:  (1 of 9) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Description:  DUF1685 family protein
Genomic Order:  4435 Name:  ? Medtr8g086820
Secondary Identifier:  ? PAC:31073906
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g086820 0.5kb upstream 0.5kb upstream 1516   true chr8: 35968348-35969863 Medicago truncatula
Medtr8g086820 0.5kb upstream 0.5kb upstream 500   false chr8: 35969364-35969863 Medicago truncatula
Medtr8g086820 0.5kb downstream 0.5kb downstream 1516   true chr8: 35967848-35969363 Medicago truncatula
Medtr8g086820 0.5kb downstream 0.5kb downstream 500   false chr8: 35967848-35968347 Medicago truncatula
Medtr8g086820 1.0kb upstream 1.0kb upstream 2016   true chr8: 35968348-35970363 Medicago truncatula
Medtr8g086820 1.0kb upstream 1.0kb upstream 1000   false chr8: 35969364-35970363 Medicago truncatula
Medtr8g086820 1.0kb downstream 1.0kb downstream 2016   true chr8: 35967348-35969363 Medicago truncatula
Medtr8g086820 1.0kb downstream 1.0kb downstream 1000   false chr8: 35967348-35968347 Medicago truncatula
Medtr8g086820 2.0kb upstream 2.0kb upstream 3016   true chr8: 35968348-35971363 Medicago truncatula
Medtr8g086820 2.0kb upstream 2.0kb upstream 2000   false chr8: 35969364-35971363 Medicago truncatula
Medtr8g086820 2.0kb downstream 2.0kb downstream 3016   true chr8: 35966348-35969363 Medicago truncatula
Medtr8g086820 2.0kb downstream 2.0kb downstream 2000   false chr8: 35966348-35968347 Medicago truncatula
Medtr8g086820 5.0kb upstream 5.0kb upstream 6016   true chr8: 35968348-35974363 Medicago truncatula
Medtr8g086820 5.0kb upstream 5.0kb upstream 5000   false chr8: 35969364-35974363 Medicago truncatula
Medtr8g086820 5.0kb downstream 5.0kb downstream 6016   true chr8: 35963348-35969363 Medicago truncatula
Medtr8g086820 5.0kb downstream 5.0kb downstream 5000   false chr8: 35963348-35968347 Medicago truncatula
Medtr8g086820 10.0kb upstream 10.0kb upstream 11016   true chr8: 35968348-35979363 Medicago truncatula
Medtr8g086820 10.0kb upstream 10.0kb upstream 10000   false chr8: 35969364-35979363 Medicago truncatula
Medtr8g086820 10.0kb downstream 10.0kb downstream 11016   true chr8: 35958348-35969363 Medicago truncatula
Medtr8g086820 10.0kb downstream 10.0kb downstream 10000   false chr8: 35958348-35968347 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309293 5265 Fabidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.751     High  
cufflinks 11.758     High  
cufflinks 26.076     High High
cufflinks 6.449       Low
cufflinks 31.579     High High
cufflinks 13.21     High  
cufflinks 12.459     High  
cufflinks 14.685     High  
cufflinks 6.999       Low

0 Strain