Gene : Medtr0036s0320 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  20
Name:  ? Medtr0036s0320 Secondary Identifier:  ? PAC:31106051
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0036s0320 0.5kb upstream 0.5kb upstream 5921   true scaffold0036: 112531-118451 Medicago truncatula
Medtr0036s0320 0.5kb upstream 0.5kb upstream 500   false scaffold0036: 117952-118451 Medicago truncatula
Medtr0036s0320 0.5kb downstream 0.5kb downstream 5921   true scaffold0036: 112031-117951 Medicago truncatula
Medtr0036s0320 0.5kb downstream 0.5kb downstream 500   false scaffold0036: 112031-112530 Medicago truncatula
Medtr0036s0320 1.0kb upstream 1.0kb upstream 5949   true scaffold0036: 112531-118479 Medicago truncatula
Medtr0036s0320 1.0kb upstream 1.0kb upstream 528   false scaffold0036: 117952-118479 Medicago truncatula
Medtr0036s0320 1.0kb downstream 1.0kb downstream 6421   true scaffold0036: 111531-117951 Medicago truncatula
Medtr0036s0320 1.0kb downstream 1.0kb downstream 1000   false scaffold0036: 111531-112530 Medicago truncatula
Medtr0036s0320 2.0kb upstream 2.0kb upstream 5949   true scaffold0036: 112531-118479 Medicago truncatula
Medtr0036s0320 2.0kb upstream 2.0kb upstream 528   false scaffold0036: 117952-118479 Medicago truncatula
Medtr0036s0320 2.0kb downstream 2.0kb downstream 7421   true scaffold0036: 110531-117951 Medicago truncatula
Medtr0036s0320 2.0kb downstream 2.0kb downstream 2000   false scaffold0036: 110531-112530 Medicago truncatula
Medtr0036s0320 5.0kb upstream 5.0kb upstream 5949   true scaffold0036: 112531-118479 Medicago truncatula
Medtr0036s0320 5.0kb upstream 5.0kb upstream 528   false scaffold0036: 117952-118479 Medicago truncatula
Medtr0036s0320 5.0kb downstream 5.0kb downstream 10421   true scaffold0036: 107531-117951 Medicago truncatula
Medtr0036s0320 5.0kb downstream 5.0kb downstream 5000   false scaffold0036: 107531-112530 Medicago truncatula
Medtr0036s0320 10.0kb upstream 10.0kb upstream 5949   true scaffold0036: 112531-118479 Medicago truncatula
Medtr0036s0320 10.0kb upstream 10.0kb upstream 528   false scaffold0036: 117952-118479 Medicago truncatula
Medtr0036s0320 10.0kb downstream 10.0kb downstream 15421   true scaffold0036: 102531-117951 Medicago truncatula
Medtr0036s0320 10.0kb downstream 10.0kb downstream 10000   false scaffold0036: 102531-112530 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122270277 5265 Fabidae Singleton cluster - no MSA
124010995 5270 Rosid Singleton cluster - no MSA
123744348 5271 Pentapetalae View MSA
122792295 5272 Eudicot View MSA
122042514 5273 Angiosperm View MSA
121347844 5274 Embryophyte View MSA
123425000 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.064     Low  
cufflinks 0.236        
cufflinks 0.249        
cufflinks 0.026     Low Low
cufflinks 0.391       High
cufflinks 0.028     Low Low
cufflinks 0.076        
cufflinks 0.197        
cufflinks 0.08     Low  

0 Strain