Gene : Medtr0036s0040 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11076:SF35 - PROTEIN CHROMOSOME TRANSMISSION FIDELITY 7 Description:  N-acetyltransferase ESCO2-like protein
Genomic Order:  3 Name:  ? Medtr0036s0040
Secondary Identifier:  ? PAC:31106058
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0036s0040 0.5kb upstream 0.5kb upstream 4945   true scaffold0036: 5948-10892 Medicago truncatula
Medtr0036s0040 0.5kb upstream 0.5kb upstream 500   false scaffold0036: 10393-10892 Medicago truncatula
Medtr0036s0040 0.5kb downstream 0.5kb downstream 4945   true scaffold0036: 5448-10392 Medicago truncatula
Medtr0036s0040 0.5kb downstream 0.5kb downstream 500   false scaffold0036: 5448-5947 Medicago truncatula
Medtr0036s0040 1.0kb upstream 1.0kb upstream 5445   true scaffold0036: 5948-11392 Medicago truncatula
Medtr0036s0040 1.0kb upstream 1.0kb upstream 1000   false scaffold0036: 10393-11392 Medicago truncatula
Medtr0036s0040 1.0kb downstream 1.0kb downstream 5445   true scaffold0036: 4948-10392 Medicago truncatula
Medtr0036s0040 1.0kb downstream 1.0kb downstream 1000   false scaffold0036: 4948-5947 Medicago truncatula
Medtr0036s0040 2.0kb upstream 2.0kb upstream 6445   true scaffold0036: 5948-12392 Medicago truncatula
Medtr0036s0040 2.0kb upstream 2.0kb upstream 2000   false scaffold0036: 10393-12392 Medicago truncatula
Medtr0036s0040 2.0kb downstream 2.0kb downstream 6445   true scaffold0036: 3948-10392 Medicago truncatula
Medtr0036s0040 2.0kb downstream 2.0kb downstream 2000   false scaffold0036: 3948-5947 Medicago truncatula
Medtr0036s0040 5.0kb upstream 5.0kb upstream 9445   true scaffold0036: 5948-15392 Medicago truncatula
Medtr0036s0040 5.0kb upstream 5.0kb upstream 5000   false scaffold0036: 10393-15392 Medicago truncatula
Medtr0036s0040 5.0kb downstream 5.0kb downstream 9445   true scaffold0036: 948-10392 Medicago truncatula
Medtr0036s0040 5.0kb downstream 5.0kb downstream 5000   false scaffold0036: 948-5947 Medicago truncatula
Medtr0036s0040 10.0kb upstream 10.0kb upstream 14445   true scaffold0036: 5948-20392 Medicago truncatula
Medtr0036s0040 10.0kb upstream 10.0kb upstream 10000   false scaffold0036: 10393-20392 Medicago truncatula
Medtr0036s0040 10.0kb downstream 10.0kb downstream 10392   true scaffold0036: 1-10392 Medicago truncatula
Medtr0036s0040 10.0kb downstream 10.0kb downstream 5947   false scaffold0036: 1-5947 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303076 5265 Fabidae View MSA
124063061 5270 Rosid View MSA
123744471 5271 Pentapetalae View MSA
122791353 5272 Eudicot View MSA
122046028 5273 Angiosperm View MSA
121348225 5274 Embryophyte View MSA
123425872 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.755        
cufflinks 0.798        
cufflinks 0.759        
cufflinks 0.322        
cufflinks 1.213       High
cufflinks 0.132     Low Low
cufflinks 0.333        
cufflinks 0.544        
cufflinks 0.562        

0 Strain