Gene : Medtr0032s0080 M. truncatula Mt4.0v1
Description:  transmembrane protein, putative Genomic Order:  7
Name:  ? Medtr0032s0080 Secondary Identifier:  ? PAC:31092067
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0032s0080 0.5kb upstream 0.5kb upstream 3576   true scaffold0032: 45572-49147 Medicago truncatula
Medtr0032s0080 0.5kb upstream 0.5kb upstream 500   false scaffold0032: 48648-49147 Medicago truncatula
Medtr0032s0080 0.5kb downstream 0.5kb downstream 3576   true scaffold0032: 45072-48647 Medicago truncatula
Medtr0032s0080 0.5kb downstream 0.5kb downstream 500   false scaffold0032: 45072-45571 Medicago truncatula
Medtr0032s0080 1.0kb upstream 1.0kb upstream 4076   true scaffold0032: 45572-49647 Medicago truncatula
Medtr0032s0080 1.0kb upstream 1.0kb upstream 1000   false scaffold0032: 48648-49647 Medicago truncatula
Medtr0032s0080 1.0kb downstream 1.0kb downstream 4076   true scaffold0032: 44572-48647 Medicago truncatula
Medtr0032s0080 1.0kb downstream 1.0kb downstream 1000   false scaffold0032: 44572-45571 Medicago truncatula
Medtr0032s0080 2.0kb upstream 2.0kb upstream 5076   true scaffold0032: 45572-50647 Medicago truncatula
Medtr0032s0080 2.0kb upstream 2.0kb upstream 2000   false scaffold0032: 48648-50647 Medicago truncatula
Medtr0032s0080 2.0kb downstream 2.0kb downstream 5076   true scaffold0032: 43572-48647 Medicago truncatula
Medtr0032s0080 2.0kb downstream 2.0kb downstream 2000   false scaffold0032: 43572-45571 Medicago truncatula
Medtr0032s0080 5.0kb upstream 5.0kb upstream 8076   true scaffold0032: 45572-53647 Medicago truncatula
Medtr0032s0080 5.0kb upstream 5.0kb upstream 5000   false scaffold0032: 48648-53647 Medicago truncatula
Medtr0032s0080 5.0kb downstream 5.0kb downstream 8076   true scaffold0032: 40572-48647 Medicago truncatula
Medtr0032s0080 5.0kb downstream 5.0kb downstream 5000   false scaffold0032: 40572-45571 Medicago truncatula
Medtr0032s0080 10.0kb upstream 10.0kb upstream 13076   true scaffold0032: 45572-58647 Medicago truncatula
Medtr0032s0080 10.0kb upstream 10.0kb upstream 10000   false scaffold0032: 48648-58647 Medicago truncatula
Medtr0032s0080 10.0kb downstream 10.0kb downstream 13076   true scaffold0032: 35572-48647 Medicago truncatula
Medtr0032s0080 10.0kb downstream 10.0kb downstream 10000   false scaffold0032: 35572-45571 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303695 5265 Fabidae View MSA
124070562 5270 Rosid View MSA
123746862 5271 Pentapetalae View MSA
122795551 5272 Eudicot View MSA
122050693 5273 Angiosperm View MSA
121312072 5274 Embryophyte View MSA
123349277 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.287       High
cufflinks 0.027     Low  
cufflinks 0.032     Low  
cufflinks 0.04     Low  
cufflinks 0.041     Low  
cufflinks 0.007     Low Low
cufflinks 0.146       High
cufflinks 0.041     Low  
cufflinks 0.036     Low  

0 Strain