Gene : Medtr0045s0080 M. truncatula Mt4.0v1
Defline:  (1 of 130) KOG0157 - Cytochrome P450 CYP4/CYP19/CYP26 subfamilies Description:  cytochrome P450 family 90 protein
Genomic Order:  4 Name:  ? Medtr0045s0080
Secondary Identifier:  ? PAC:31084906
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0045s0080 0.5kb upstream 0.5kb upstream 5077   true scaffold0045: 37931-43007 Medicago truncatula
Medtr0045s0080 0.5kb upstream 0.5kb upstream 500   false scaffold0045: 37931-38430 Medicago truncatula
Medtr0045s0080 0.5kb downstream 0.5kb downstream 5077   true scaffold0045: 38431-43507 Medicago truncatula
Medtr0045s0080 0.5kb downstream 0.5kb downstream 500   false scaffold0045: 43008-43507 Medicago truncatula
Medtr0045s0080 1.0kb upstream 1.0kb upstream 5577   true scaffold0045: 37431-43007 Medicago truncatula
Medtr0045s0080 1.0kb upstream 1.0kb upstream 1000   false scaffold0045: 37431-38430 Medicago truncatula
Medtr0045s0080 1.0kb downstream 1.0kb downstream 5577   true scaffold0045: 38431-44007 Medicago truncatula
Medtr0045s0080 1.0kb downstream 1.0kb downstream 1000   false scaffold0045: 43008-44007 Medicago truncatula
Medtr0045s0080 2.0kb upstream 2.0kb upstream 6577   true scaffold0045: 36431-43007 Medicago truncatula
Medtr0045s0080 2.0kb upstream 2.0kb upstream 2000   false scaffold0045: 36431-38430 Medicago truncatula
Medtr0045s0080 2.0kb downstream 2.0kb downstream 6577   true scaffold0045: 38431-45007 Medicago truncatula
Medtr0045s0080 2.0kb downstream 2.0kb downstream 2000   false scaffold0045: 43008-45007 Medicago truncatula
Medtr0045s0080 5.0kb upstream 5.0kb upstream 9577   true scaffold0045: 33431-43007 Medicago truncatula
Medtr0045s0080 5.0kb upstream 5.0kb upstream 5000   false scaffold0045: 33431-38430 Medicago truncatula
Medtr0045s0080 5.0kb downstream 5.0kb downstream 9577   true scaffold0045: 38431-48007 Medicago truncatula
Medtr0045s0080 5.0kb downstream 5.0kb downstream 5000   false scaffold0045: 43008-48007 Medicago truncatula
Medtr0045s0080 10.0kb upstream 10.0kb upstream 14577   true scaffold0045: 28431-43007 Medicago truncatula
Medtr0045s0080 10.0kb upstream 10.0kb upstream 10000   false scaffold0045: 28431-38430 Medicago truncatula
Medtr0045s0080 10.0kb downstream 10.0kb downstream 14577   true scaffold0045: 38431-53007 Medicago truncatula
Medtr0045s0080 10.0kb downstream 10.0kb downstream 10000   false scaffold0045: 43008-53007 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316719 5265 Fabidae View MSA
124051987 5270 Rosid View MSA
123755989 5271 Pentapetalae View MSA
122798414 5272 Eudicot View MSA
122051699 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121312618 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain