Gene : Medtr0049s0110 M. truncatula Mt4.0v1
Defline:  (1 of 76) PF00646//PF08387 - F-box domain (F-box) // FBD (FBD) Description:  F-box/RNI/FBD-like domain protein
Genomic Order:  5 Name:  ? Medtr0049s0110
Secondary Identifier:  ? PAC:31092409
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0049s0110 0.5kb upstream 0.5kb upstream 3387   true scaffold0049: 71890-75276 Medicago truncatula
Medtr0049s0110 0.5kb upstream 0.5kb upstream 500   false scaffold0049: 74777-75276 Medicago truncatula
Medtr0049s0110 0.5kb downstream 0.5kb downstream 3387   true scaffold0049: 71390-74776 Medicago truncatula
Medtr0049s0110 0.5kb downstream 0.5kb downstream 500   false scaffold0049: 71390-71889 Medicago truncatula
Medtr0049s0110 1.0kb upstream 1.0kb upstream 3887   true scaffold0049: 71890-75776 Medicago truncatula
Medtr0049s0110 1.0kb upstream 1.0kb upstream 1000   false scaffold0049: 74777-75776 Medicago truncatula
Medtr0049s0110 1.0kb downstream 1.0kb downstream 3887   true scaffold0049: 70890-74776 Medicago truncatula
Medtr0049s0110 1.0kb downstream 1.0kb downstream 1000   false scaffold0049: 70890-71889 Medicago truncatula
Medtr0049s0110 2.0kb upstream 2.0kb upstream 4887   true scaffold0049: 71890-76776 Medicago truncatula
Medtr0049s0110 2.0kb upstream 2.0kb upstream 2000   false scaffold0049: 74777-76776 Medicago truncatula
Medtr0049s0110 2.0kb downstream 2.0kb downstream 4887   true scaffold0049: 69890-74776 Medicago truncatula
Medtr0049s0110 2.0kb downstream 2.0kb downstream 2000   false scaffold0049: 69890-71889 Medicago truncatula
Medtr0049s0110 5.0kb upstream 5.0kb upstream 7887   true scaffold0049: 71890-79776 Medicago truncatula
Medtr0049s0110 5.0kb upstream 5.0kb upstream 5000   false scaffold0049: 74777-79776 Medicago truncatula
Medtr0049s0110 5.0kb downstream 5.0kb downstream 7887   true scaffold0049: 66890-74776 Medicago truncatula
Medtr0049s0110 5.0kb downstream 5.0kb downstream 5000   false scaffold0049: 66890-71889 Medicago truncatula
Medtr0049s0110 10.0kb upstream 10.0kb upstream 12887   true scaffold0049: 71890-84776 Medicago truncatula
Medtr0049s0110 10.0kb upstream 10.0kb upstream 10000   false scaffold0049: 74777-84776 Medicago truncatula
Medtr0049s0110 10.0kb downstream 10.0kb downstream 12887   true scaffold0049: 61890-74776 Medicago truncatula
Medtr0049s0110 10.0kb downstream 10.0kb downstream 10000   false scaffold0049: 61890-71889 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304842 5265 Fabidae View MSA
124071002 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.557        
cufflinks 0.891        
cufflinks 1.24        
cufflinks 0.334        
cufflinks 1.191        
cufflinks 0.049     Low Low
cufflinks 0.312        
cufflinks 1.035        
cufflinks 0.306        

0 Strain