Gene : Medtr0072s0040 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR34053:SF1 - PROTEIN ULTRAPETALA 1-RELATED Description:  ultrapetala developmental regulator
Genomic Order:  2 Name:  ? Medtr0072s0040
Secondary Identifier:  ? PAC:31084919
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0072s0040 0.5kb upstream 0.5kb upstream 5162   true scaffold0072: 21137-26298 Medicago truncatula
Medtr0072s0040 0.5kb upstream 0.5kb upstream 500   false scaffold0072: 21137-21636 Medicago truncatula
Medtr0072s0040 0.5kb downstream 0.5kb downstream 5162   true scaffold0072: 21637-26798 Medicago truncatula
Medtr0072s0040 0.5kb downstream 0.5kb downstream 500   false scaffold0072: 26299-26798 Medicago truncatula
Medtr0072s0040 1.0kb upstream 1.0kb upstream 5662   true scaffold0072: 20637-26298 Medicago truncatula
Medtr0072s0040 1.0kb upstream 1.0kb upstream 1000   false scaffold0072: 20637-21636 Medicago truncatula
Medtr0072s0040 1.0kb downstream 1.0kb downstream 5662   true scaffold0072: 21637-27298 Medicago truncatula
Medtr0072s0040 1.0kb downstream 1.0kb downstream 1000   false scaffold0072: 26299-27298 Medicago truncatula
Medtr0072s0040 2.0kb upstream 2.0kb upstream 6662   true scaffold0072: 19637-26298 Medicago truncatula
Medtr0072s0040 2.0kb upstream 2.0kb upstream 2000   false scaffold0072: 19637-21636 Medicago truncatula
Medtr0072s0040 2.0kb downstream 2.0kb downstream 6662   true scaffold0072: 21637-28298 Medicago truncatula
Medtr0072s0040 2.0kb downstream 2.0kb downstream 2000   false scaffold0072: 26299-28298 Medicago truncatula
Medtr0072s0040 5.0kb upstream 5.0kb upstream 9662   true scaffold0072: 16637-26298 Medicago truncatula
Medtr0072s0040 5.0kb upstream 5.0kb upstream 5000   false scaffold0072: 16637-21636 Medicago truncatula
Medtr0072s0040 5.0kb downstream 5.0kb downstream 9662   true scaffold0072: 21637-31298 Medicago truncatula
Medtr0072s0040 5.0kb downstream 5.0kb downstream 5000   false scaffold0072: 26299-31298 Medicago truncatula
Medtr0072s0040 10.0kb upstream 10.0kb upstream 14662   true scaffold0072: 11637-26298 Medicago truncatula
Medtr0072s0040 10.0kb upstream 10.0kb upstream 10000   false scaffold0072: 11637-21636 Medicago truncatula
Medtr0072s0040 10.0kb downstream 10.0kb downstream 14662   true scaffold0072: 21637-36298 Medicago truncatula
Medtr0072s0040 10.0kb downstream 10.0kb downstream 10000   false scaffold0072: 26299-36298 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299051 5265 Fabidae View MSA
124065655 5270 Rosid View MSA
123743766 5271 Pentapetalae View MSA
122795769 5272 Eudicot View MSA
122043441 5273 Angiosperm View MSA
121310126 5274 Embryophyte View MSA
123347700 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.872        
cufflinks 0.743        
cufflinks 0.608       Low
cufflinks 4.539       High
cufflinks 1.076        
cufflinks 0.981        
cufflinks 3.741       High
cufflinks 0.592       Low
cufflinks 3.743       High

0 Strain