Gene : Medtr0062s0060 M. truncatula Mt4.0v1
Defline:  (1 of 17) PTHR11177//PTHR11177:SF190 - CHITINASE Description:  narbonin-like 2S protein
Genomic Order:  4 Name:  ? Medtr0062s0060
Secondary Identifier:  ? PAC:31100864
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6902 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0062s0060 0.5kb upstream 0.5kb upstream 1475   true scaffold0062: 25100-26574 Medicago truncatula
Medtr0062s0060 0.5kb upstream 0.5kb upstream 500   false scaffold0062: 25100-25599 Medicago truncatula
Medtr0062s0060 0.5kb downstream 0.5kb downstream 1475   true scaffold0062: 25600-27074 Medicago truncatula
Medtr0062s0060 0.5kb downstream 0.5kb downstream 500   false scaffold0062: 26575-27074 Medicago truncatula
Medtr0062s0060 1.0kb upstream 1.0kb upstream 1975   true scaffold0062: 24600-26574 Medicago truncatula
Medtr0062s0060 1.0kb upstream 1.0kb upstream 1000   false scaffold0062: 24600-25599 Medicago truncatula
Medtr0062s0060 1.0kb downstream 1.0kb downstream 1975   true scaffold0062: 25600-27574 Medicago truncatula
Medtr0062s0060 1.0kb downstream 1.0kb downstream 1000   false scaffold0062: 26575-27574 Medicago truncatula
Medtr0062s0060 2.0kb upstream 2.0kb upstream 2975   true scaffold0062: 23600-26574 Medicago truncatula
Medtr0062s0060 2.0kb upstream 2.0kb upstream 2000   false scaffold0062: 23600-25599 Medicago truncatula
Medtr0062s0060 2.0kb downstream 2.0kb downstream 2975   true scaffold0062: 25600-28574 Medicago truncatula
Medtr0062s0060 2.0kb downstream 2.0kb downstream 2000   false scaffold0062: 26575-28574 Medicago truncatula
Medtr0062s0060 5.0kb upstream 5.0kb upstream 5975   true scaffold0062: 20600-26574 Medicago truncatula
Medtr0062s0060 5.0kb upstream 5.0kb upstream 5000   false scaffold0062: 20600-25599 Medicago truncatula
Medtr0062s0060 5.0kb downstream 5.0kb downstream 5975   true scaffold0062: 25600-31574 Medicago truncatula
Medtr0062s0060 5.0kb downstream 5.0kb downstream 5000   false scaffold0062: 26575-31574 Medicago truncatula
Medtr0062s0060 10.0kb upstream 10.0kb upstream 10975   true scaffold0062: 15600-26574 Medicago truncatula
Medtr0062s0060 10.0kb upstream 10.0kb upstream 10000   false scaffold0062: 15600-25599 Medicago truncatula
Medtr0062s0060 10.0kb downstream 10.0kb downstream 10975   true scaffold0062: 25600-36574 Medicago truncatula
Medtr0062s0060 10.0kb downstream 10.0kb downstream 10000   false scaffold0062: 26575-36574 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316551 5265 Fabidae View MSA
124072600 5270 Rosid View MSA
123749602 5271 Pentapetalae View MSA
122797171 5272 Eudicot View MSA
122049953 5273 Angiosperm View MSA
121348698 5274 Embryophyte View MSA
123380978 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain