Gene : Medtr0082s0030 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11831:SF12 - RIBOSOMAL PROTEIN S4, MITOCHONDRIAL Description:  ribosomal protein S4
Genomic Order:  2 Name:  ? Medtr0082s0030
Secondary Identifier:  ? PAC:31076847
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0082s0030 0.5kb upstream 0.5kb upstream 1616   true scaffold0082: 12724-14339 Medicago truncatula
Medtr0082s0030 0.5kb upstream 0.5kb upstream 500   false scaffold0082: 13840-14339 Medicago truncatula
Medtr0082s0030 0.5kb downstream 0.5kb downstream 1616   true scaffold0082: 12224-13839 Medicago truncatula
Medtr0082s0030 0.5kb downstream 0.5kb downstream 500   false scaffold0082: 12224-12723 Medicago truncatula
Medtr0082s0030 1.0kb upstream 1.0kb upstream 2116   true scaffold0082: 12724-14839 Medicago truncatula
Medtr0082s0030 1.0kb upstream 1.0kb upstream 1000   false scaffold0082: 13840-14839 Medicago truncatula
Medtr0082s0030 1.0kb downstream 1.0kb downstream 2116   true scaffold0082: 11724-13839 Medicago truncatula
Medtr0082s0030 1.0kb downstream 1.0kb downstream 1000   false scaffold0082: 11724-12723 Medicago truncatula
Medtr0082s0030 2.0kb upstream 2.0kb upstream 3116   true scaffold0082: 12724-15839 Medicago truncatula
Medtr0082s0030 2.0kb upstream 2.0kb upstream 2000   false scaffold0082: 13840-15839 Medicago truncatula
Medtr0082s0030 2.0kb downstream 2.0kb downstream 3116   true scaffold0082: 10724-13839 Medicago truncatula
Medtr0082s0030 2.0kb downstream 2.0kb downstream 2000   false scaffold0082: 10724-12723 Medicago truncatula
Medtr0082s0030 5.0kb upstream 5.0kb upstream 6116   true scaffold0082: 12724-18839 Medicago truncatula
Medtr0082s0030 5.0kb upstream 5.0kb upstream 5000   false scaffold0082: 13840-18839 Medicago truncatula
Medtr0082s0030 5.0kb downstream 5.0kb downstream 6116   true scaffold0082: 7724-13839 Medicago truncatula
Medtr0082s0030 5.0kb downstream 5.0kb downstream 5000   false scaffold0082: 7724-12723 Medicago truncatula
Medtr0082s0030 10.0kb upstream 10.0kb upstream 11116   true scaffold0082: 12724-23839 Medicago truncatula
Medtr0082s0030 10.0kb upstream 10.0kb upstream 10000   false scaffold0082: 13840-23839 Medicago truncatula
Medtr0082s0030 10.0kb downstream 10.0kb downstream 11116   true scaffold0082: 2724-13839 Medicago truncatula
Medtr0082s0030 10.0kb downstream 10.0kb downstream 10000   false scaffold0082: 2724-12723 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026997 5273 Angiosperm View MSA
122289330 5265 Fabidae View MSA
124069507 5270 Rosid View MSA
123748461 5271 Pentapetalae View MSA
122772633 5272 Eudicot View MSA
121296723 5274 Embryophyte View MSA
123334843 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.135       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.084        
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain