Gene : Medtr0097s0070 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11615//PTHR11615:SF120 - NITRATE, FROMATE, IRON DEHYDROGENASE Description:  CASP POPTRDRAFT-like protein
Genomic Order:  5 Name:  ? Medtr0097s0070
Secondary Identifier:  ? PAC:31084927
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0097s0070 0.5kb upstream 0.5kb upstream 2317   true scaffold0097: 37693-40009 Medicago truncatula
Medtr0097s0070 0.5kb upstream 0.5kb upstream 500   false scaffold0097: 39510-40009 Medicago truncatula
Medtr0097s0070 0.5kb downstream 0.5kb downstream 2317   true scaffold0097: 37193-39509 Medicago truncatula
Medtr0097s0070 0.5kb downstream 0.5kb downstream 500   false scaffold0097: 37193-37692 Medicago truncatula
Medtr0097s0070 1.0kb upstream 1.0kb upstream 2817   true scaffold0097: 37693-40509 Medicago truncatula
Medtr0097s0070 1.0kb upstream 1.0kb upstream 1000   false scaffold0097: 39510-40509 Medicago truncatula
Medtr0097s0070 1.0kb downstream 1.0kb downstream 2817   true scaffold0097: 36693-39509 Medicago truncatula
Medtr0097s0070 1.0kb downstream 1.0kb downstream 1000   false scaffold0097: 36693-37692 Medicago truncatula
Medtr0097s0070 2.0kb upstream 2.0kb upstream 3817   true scaffold0097: 37693-41509 Medicago truncatula
Medtr0097s0070 2.0kb upstream 2.0kb upstream 2000   false scaffold0097: 39510-41509 Medicago truncatula
Medtr0097s0070 2.0kb downstream 2.0kb downstream 3817   true scaffold0097: 35693-39509 Medicago truncatula
Medtr0097s0070 2.0kb downstream 2.0kb downstream 2000   false scaffold0097: 35693-37692 Medicago truncatula
Medtr0097s0070 5.0kb upstream 5.0kb upstream 6817   true scaffold0097: 37693-44509 Medicago truncatula
Medtr0097s0070 5.0kb upstream 5.0kb upstream 5000   false scaffold0097: 39510-44509 Medicago truncatula
Medtr0097s0070 5.0kb downstream 5.0kb downstream 6817   true scaffold0097: 32693-39509 Medicago truncatula
Medtr0097s0070 5.0kb downstream 5.0kb downstream 5000   false scaffold0097: 32693-37692 Medicago truncatula
Medtr0097s0070 10.0kb upstream 10.0kb upstream 11817   true scaffold0097: 37693-49509 Medicago truncatula
Medtr0097s0070 10.0kb upstream 10.0kb upstream 10000   false scaffold0097: 39510-49509 Medicago truncatula
Medtr0097s0070 10.0kb downstream 10.0kb downstream 11817   true scaffold0097: 27693-39509 Medicago truncatula
Medtr0097s0070 10.0kb downstream 10.0kb downstream 10000   false scaffold0097: 27693-37692 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313563 5265 Fabidae View MSA
124065641 5270 Rosid View MSA
123739206 5271 Pentapetalae View MSA
122793621 5272 Eudicot View MSA
122046791 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.668        
cufflinks 0.125       Low
cufflinks 0.144        
cufflinks 11.941     High  
cufflinks 0.2        
cufflinks 6.9        
cufflinks 22.838     High High
cufflinks 0.109       Low
cufflinks 14.235     High High

0 Strain