Gene : Medtr0092s0090 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF03109//PF09749 - ABC1 family (ABC1) // Uncharacterised conserved protein (HVSL) Description:  ABC1 family protein
Genomic Order:  4 Name:  ? Medtr0092s0090
Secondary Identifier:  ? PAC:31106033
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0092s0090 0.5kb upstream 0.5kb upstream 5863   true scaffold0092: 39895-45757 Medicago truncatula
Medtr0092s0090 0.5kb upstream 0.5kb upstream 500   false scaffold0092: 39895-40394 Medicago truncatula
Medtr0092s0090 0.5kb downstream 0.5kb downstream 5863   true scaffold0092: 40395-46257 Medicago truncatula
Medtr0092s0090 0.5kb downstream 0.5kb downstream 500   false scaffold0092: 45758-46257 Medicago truncatula
Medtr0092s0090 1.0kb upstream 1.0kb upstream 6363   true scaffold0092: 39395-45757 Medicago truncatula
Medtr0092s0090 1.0kb upstream 1.0kb upstream 1000   false scaffold0092: 39395-40394 Medicago truncatula
Medtr0092s0090 1.0kb downstream 1.0kb downstream 6363   true scaffold0092: 40395-46757 Medicago truncatula
Medtr0092s0090 1.0kb downstream 1.0kb downstream 1000   false scaffold0092: 45758-46757 Medicago truncatula
Medtr0092s0090 2.0kb upstream 2.0kb upstream 7363   true scaffold0092: 38395-45757 Medicago truncatula
Medtr0092s0090 2.0kb upstream 2.0kb upstream 2000   false scaffold0092: 38395-40394 Medicago truncatula
Medtr0092s0090 2.0kb downstream 2.0kb downstream 7363   true scaffold0092: 40395-47757 Medicago truncatula
Medtr0092s0090 2.0kb downstream 2.0kb downstream 2000   false scaffold0092: 45758-47757 Medicago truncatula
Medtr0092s0090 5.0kb upstream 5.0kb upstream 10363   true scaffold0092: 35395-45757 Medicago truncatula
Medtr0092s0090 5.0kb upstream 5.0kb upstream 5000   false scaffold0092: 35395-40394 Medicago truncatula
Medtr0092s0090 5.0kb downstream 5.0kb downstream 10363   true scaffold0092: 40395-50757 Medicago truncatula
Medtr0092s0090 5.0kb downstream 5.0kb downstream 5000   false scaffold0092: 45758-50757 Medicago truncatula
Medtr0092s0090 10.0kb upstream 10.0kb upstream 15363   true scaffold0092: 30395-45757 Medicago truncatula
Medtr0092s0090 10.0kb upstream 10.0kb upstream 10000   false scaffold0092: 30395-40394 Medicago truncatula
Medtr0092s0090 10.0kb downstream 10.0kb downstream 14467   true scaffold0092: 40395-54861 Medicago truncatula
Medtr0092s0090 10.0kb downstream 10.0kb downstream 9104   false scaffold0092: 45758-54861 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300312 5265 Fabidae View MSA
124068859 5270 Rosid View MSA
123738361 5271 Pentapetalae View MSA
122785872 5272 Eudicot View MSA
122050047 5273 Angiosperm View MSA
123429042 5275 Viridiplantae View MSA
121344227 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.235       High
cufflinks 0.068     Low  
cufflinks 0.056     Low  
cufflinks 0.179        
cufflinks 0.063     Low  
cufflinks 0.034     Low Low
cufflinks 0.216       High
cufflinks 0.05     Low  
cufflinks 0.164        

0 Strain