Gene : Medtr8g005360 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR17098 - NADH-UBIQUINONE OXIDOREDUCTASE MWFE SUBUNIT Description:  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
Genomic Order:  10 Name:  ? Medtr8g005360
Secondary Identifier:  ? PAC:31075138
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3781 Medicago truncatula pathologic  
Mtruncatula PWY-4302 Medicago truncatula pathologic  
Mtruncatula PWY-5083 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g005360 0.5kb upstream 0.5kb upstream 805   true chr8: 60486-61290 Medicago truncatula
Medtr8g005360 0.5kb upstream 0.5kb upstream 500   false chr8: 60791-61290 Medicago truncatula
Medtr8g005360 0.5kb downstream 0.5kb downstream 805   true chr8: 59986-60790 Medicago truncatula
Medtr8g005360 0.5kb downstream 0.5kb downstream 500   false chr8: 59986-60485 Medicago truncatula
Medtr8g005360 1.0kb upstream 1.0kb upstream 1305   true chr8: 60486-61790 Medicago truncatula
Medtr8g005360 1.0kb upstream 1.0kb upstream 1000   false chr8: 60791-61790 Medicago truncatula
Medtr8g005360 1.0kb downstream 1.0kb downstream 1305   true chr8: 59486-60790 Medicago truncatula
Medtr8g005360 1.0kb downstream 1.0kb downstream 1000   false chr8: 59486-60485 Medicago truncatula
Medtr8g005360 2.0kb upstream 2.0kb upstream 2305   true chr8: 60486-62790 Medicago truncatula
Medtr8g005360 2.0kb upstream 2.0kb upstream 2000   false chr8: 60791-62790 Medicago truncatula
Medtr8g005360 2.0kb downstream 2.0kb downstream 2305   true chr8: 58486-60790 Medicago truncatula
Medtr8g005360 2.0kb downstream 2.0kb downstream 2000   false chr8: 58486-60485 Medicago truncatula
Medtr8g005360 5.0kb upstream 5.0kb upstream 5305   true chr8: 60486-65790 Medicago truncatula
Medtr8g005360 5.0kb upstream 5.0kb upstream 5000   false chr8: 60791-65790 Medicago truncatula
Medtr8g005360 5.0kb downstream 5.0kb downstream 5305   true chr8: 55486-60790 Medicago truncatula
Medtr8g005360 5.0kb downstream 5.0kb downstream 5000   false chr8: 55486-60485 Medicago truncatula
Medtr8g005360 10.0kb upstream 10.0kb upstream 10305   true chr8: 60486-70790 Medicago truncatula
Medtr8g005360 10.0kb upstream 10.0kb upstream 10000   false chr8: 60791-70790 Medicago truncatula
Medtr8g005360 10.0kb downstream 10.0kb downstream 10305   true chr8: 50486-60790 Medicago truncatula
Medtr8g005360 10.0kb downstream 10.0kb downstream 10000   false chr8: 50486-60485 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026299 5273 Angiosperm View MSA
122299728 5265 Fabidae View MSA
124063685 5270 Rosid View MSA
123737855 5271 Pentapetalae View MSA
122792879 5272 Eudicot View MSA
121345909 5274 Embryophyte View MSA
123427209 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 119.811     High  
cufflinks 116.545     High  
cufflinks 135.838     High  
cufflinks 387.055     High High
cufflinks 135.264     High  
cufflinks 425.971     High High
cufflinks 187.956     High  
cufflinks 134.317     High  
cufflinks 290.456     High  

0 Strain