Gene : Medtr8g005175 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Description:  oxygen-evolving enhancer protein
Genomic Order:  14 Name:  ? Medtr8g005175
Secondary Identifier:  ? PAC:31073803
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g005175 0.5kb upstream 0.5kb upstream 2865   true chr8: 82817-85681 Medicago truncatula
Medtr8g005175 0.5kb upstream 0.5kb upstream 500   false chr8: 82817-83316 Medicago truncatula
Medtr8g005175 0.5kb downstream 0.5kb downstream 2865   true chr8: 83317-86181 Medicago truncatula
Medtr8g005175 0.5kb downstream 0.5kb downstream 500   false chr8: 85682-86181 Medicago truncatula
Medtr8g005175 1.0kb upstream 1.0kb upstream 3365   true chr8: 82317-85681 Medicago truncatula
Medtr8g005175 1.0kb upstream 1.0kb upstream 1000   false chr8: 82317-83316 Medicago truncatula
Medtr8g005175 1.0kb downstream 1.0kb downstream 3365   true chr8: 83317-86681 Medicago truncatula
Medtr8g005175 1.0kb downstream 1.0kb downstream 1000   false chr8: 85682-86681 Medicago truncatula
Medtr8g005175 2.0kb upstream 2.0kb upstream 4365   true chr8: 81317-85681 Medicago truncatula
Medtr8g005175 2.0kb upstream 2.0kb upstream 2000   false chr8: 81317-83316 Medicago truncatula
Medtr8g005175 2.0kb downstream 2.0kb downstream 4365   true chr8: 83317-87681 Medicago truncatula
Medtr8g005175 2.0kb downstream 2.0kb downstream 2000   false chr8: 85682-87681 Medicago truncatula
Medtr8g005175 5.0kb upstream 5.0kb upstream 7365   true chr8: 78317-85681 Medicago truncatula
Medtr8g005175 5.0kb upstream 5.0kb upstream 5000   false chr8: 78317-83316 Medicago truncatula
Medtr8g005175 5.0kb downstream 5.0kb downstream 7365   true chr8: 83317-90681 Medicago truncatula
Medtr8g005175 5.0kb downstream 5.0kb downstream 5000   false chr8: 85682-90681 Medicago truncatula
Medtr8g005175 10.0kb upstream 10.0kb upstream 12365   true chr8: 73317-85681 Medicago truncatula
Medtr8g005175 10.0kb upstream 10.0kb upstream 10000   false chr8: 73317-83316 Medicago truncatula
Medtr8g005175 10.0kb downstream 10.0kb downstream 12365   true chr8: 83317-95681 Medicago truncatula
Medtr8g005175 10.0kb downstream 10.0kb downstream 10000   false chr8: 85682-95681 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306013 5265 Fabidae View MSA
124068035 5270 Rosid View MSA
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.826        
cufflinks 604.755     High High
cufflinks 416.556     High  
cufflinks 0.234        
cufflinks 590.063     High High
cufflinks 0.352        
cufflinks 0.234        
cufflinks 533.034     High High
cufflinks 0.621        

0 Strain