Gene : Medtr8g006790 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24093:SF327 - ATPASE 11, PLASMA MEMBRANE-TYPE Description:  plasma membrane H+-ATPase
Genomic Order:  117 Name:  ? Medtr8g006790
Secondary Identifier:  ? PAC:31076083
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g006790 0.5kb upstream 0.5kb upstream 6991   true chr8: 970171-977161 Medicago truncatula
Medtr8g006790 0.5kb upstream 0.5kb upstream 500   false chr8: 976662-977161 Medicago truncatula
Medtr8g006790 0.5kb downstream 0.5kb downstream 6991   true chr8: 969671-976661 Medicago truncatula
Medtr8g006790 0.5kb downstream 0.5kb downstream 500   false chr8: 969671-970170 Medicago truncatula
Medtr8g006790 1.0kb upstream 1.0kb upstream 7491   true chr8: 970171-977661 Medicago truncatula
Medtr8g006790 1.0kb upstream 1.0kb upstream 1000   false chr8: 976662-977661 Medicago truncatula
Medtr8g006790 1.0kb downstream 1.0kb downstream 7491   true chr8: 969171-976661 Medicago truncatula
Medtr8g006790 1.0kb downstream 1.0kb downstream 1000   false chr8: 969171-970170 Medicago truncatula
Medtr8g006790 2.0kb upstream 2.0kb upstream 8491   true chr8: 970171-978661 Medicago truncatula
Medtr8g006790 2.0kb upstream 2.0kb upstream 2000   false chr8: 976662-978661 Medicago truncatula
Medtr8g006790 2.0kb downstream 2.0kb downstream 8491   true chr8: 968171-976661 Medicago truncatula
Medtr8g006790 2.0kb downstream 2.0kb downstream 2000   false chr8: 968171-970170 Medicago truncatula
Medtr8g006790 5.0kb upstream 5.0kb upstream 11491   true chr8: 970171-981661 Medicago truncatula
Medtr8g006790 5.0kb upstream 5.0kb upstream 5000   false chr8: 976662-981661 Medicago truncatula
Medtr8g006790 5.0kb downstream 5.0kb downstream 11491   true chr8: 965171-976661 Medicago truncatula
Medtr8g006790 5.0kb downstream 5.0kb downstream 5000   false chr8: 965171-970170 Medicago truncatula
Medtr8g006790 10.0kb upstream 10.0kb upstream 16491   true chr8: 970171-986661 Medicago truncatula
Medtr8g006790 10.0kb upstream 10.0kb upstream 10000   false chr8: 976662-986661 Medicago truncatula
Medtr8g006790 10.0kb downstream 10.0kb downstream 16491   true chr8: 960171-976661 Medicago truncatula
Medtr8g006790 10.0kb downstream 10.0kb downstream 10000   false chr8: 960171-970170 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302434 5265 Fabidae View MSA
124067103 5270 Rosid View MSA
123745200 5271 Pentapetalae View MSA
122795263 5272 Eudicot View MSA
122049671 5273 Angiosperm View MSA
121311532 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.12     High High
cufflinks 0.012     Low  
cufflinks 0.02     Low  
cufflinks 0.003     Low  
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.009     Low  

0 Strain