Gene : Medtr0002s0800 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF00203//PF03947 - Ribosomal protein S19 (Ribosomal_S19) // Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) Description:  50S ribosomal protein L2P
Genomic Order:  50 Name:  ? Medtr0002s0800
Secondary Identifier:  ? PAC:31084747
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0002s0800 0.5kb upstream 0.5kb upstream 1451   true scaffold0002: 280819-282269 Medicago truncatula
Medtr0002s0800 0.5kb upstream 0.5kb upstream 500   false scaffold0002: 281770-282269 Medicago truncatula
Medtr0002s0800 0.5kb downstream 0.5kb downstream 1451   true scaffold0002: 280319-281769 Medicago truncatula
Medtr0002s0800 0.5kb downstream 0.5kb downstream 500   false scaffold0002: 280319-280818 Medicago truncatula
Medtr0002s0800 1.0kb upstream 1.0kb upstream 1951   true scaffold0002: 280819-282769 Medicago truncatula
Medtr0002s0800 1.0kb upstream 1.0kb upstream 1000   false scaffold0002: 281770-282769 Medicago truncatula
Medtr0002s0800 1.0kb downstream 1.0kb downstream 1951   true scaffold0002: 279819-281769 Medicago truncatula
Medtr0002s0800 1.0kb downstream 1.0kb downstream 1000   false scaffold0002: 279819-280818 Medicago truncatula
Medtr0002s0800 2.0kb upstream 2.0kb upstream 2951   true scaffold0002: 280819-283769 Medicago truncatula
Medtr0002s0800 2.0kb upstream 2.0kb upstream 2000   false scaffold0002: 281770-283769 Medicago truncatula
Medtr0002s0800 2.0kb downstream 2.0kb downstream 2951   true scaffold0002: 278819-281769 Medicago truncatula
Medtr0002s0800 2.0kb downstream 2.0kb downstream 2000   false scaffold0002: 278819-280818 Medicago truncatula
Medtr0002s0800 5.0kb upstream 5.0kb upstream 5951   true scaffold0002: 280819-286769 Medicago truncatula
Medtr0002s0800 5.0kb upstream 5.0kb upstream 5000   false scaffold0002: 281770-286769 Medicago truncatula
Medtr0002s0800 5.0kb downstream 5.0kb downstream 5951   true scaffold0002: 275819-281769 Medicago truncatula
Medtr0002s0800 5.0kb downstream 5.0kb downstream 5000   false scaffold0002: 275819-280818 Medicago truncatula
Medtr0002s0800 10.0kb upstream 10.0kb upstream 10951   true scaffold0002: 280819-291769 Medicago truncatula
Medtr0002s0800 10.0kb upstream 10.0kb upstream 10000   false scaffold0002: 281770-291769 Medicago truncatula
Medtr0002s0800 10.0kb downstream 10.0kb downstream 10951   true scaffold0002: 270819-281769 Medicago truncatula
Medtr0002s0800 10.0kb downstream 10.0kb downstream 10000   false scaffold0002: 270819-280818 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122271416 5265 Fabidae View MSA
124038697 5270 Rosid View MSA
123748926 5271 Pentapetalae View MSA
122797824 5272 Eudicot View MSA
122049375 5273 Angiosperm View MSA
123428909 5275 Viridiplantae View MSA
121350673 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain