Gene : Medtr0002s0780 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00238//PF00252 - Ribosomal protein L14p/L23e (Ribosomal_L14) // Ribosomal protein L16p/L10e (Ribosomal_L16) Description:  50S ribosomal protein L16
Genomic Order:  48 Name:  ? Medtr0002s0780
Secondary Identifier:  ? PAC:31084758
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0002s0780 0.5kb upstream 0.5kb upstream 1436   true scaffold0002: 277415-278850 Medicago truncatula
Medtr0002s0780 0.5kb upstream 0.5kb upstream 500   false scaffold0002: 278351-278850 Medicago truncatula
Medtr0002s0780 0.5kb downstream 0.5kb downstream 1436   true scaffold0002: 276915-278350 Medicago truncatula
Medtr0002s0780 0.5kb downstream 0.5kb downstream 500   false scaffold0002: 276915-277414 Medicago truncatula
Medtr0002s0780 1.0kb upstream 1.0kb upstream 1936   true scaffold0002: 277415-279350 Medicago truncatula
Medtr0002s0780 1.0kb upstream 1.0kb upstream 1000   false scaffold0002: 278351-279350 Medicago truncatula
Medtr0002s0780 1.0kb downstream 1.0kb downstream 1936   true scaffold0002: 276415-278350 Medicago truncatula
Medtr0002s0780 1.0kb downstream 1.0kb downstream 1000   false scaffold0002: 276415-277414 Medicago truncatula
Medtr0002s0780 2.0kb upstream 2.0kb upstream 2936   true scaffold0002: 277415-280350 Medicago truncatula
Medtr0002s0780 2.0kb upstream 2.0kb upstream 2000   false scaffold0002: 278351-280350 Medicago truncatula
Medtr0002s0780 2.0kb downstream 2.0kb downstream 2936   true scaffold0002: 275415-278350 Medicago truncatula
Medtr0002s0780 2.0kb downstream 2.0kb downstream 2000   false scaffold0002: 275415-277414 Medicago truncatula
Medtr0002s0780 5.0kb upstream 5.0kb upstream 5936   true scaffold0002: 277415-283350 Medicago truncatula
Medtr0002s0780 5.0kb upstream 5.0kb upstream 5000   false scaffold0002: 278351-283350 Medicago truncatula
Medtr0002s0780 5.0kb downstream 5.0kb downstream 5936   true scaffold0002: 272415-278350 Medicago truncatula
Medtr0002s0780 5.0kb downstream 5.0kb downstream 5000   false scaffold0002: 272415-277414 Medicago truncatula
Medtr0002s0780 10.0kb upstream 10.0kb upstream 10936   true scaffold0002: 277415-288350 Medicago truncatula
Medtr0002s0780 10.0kb upstream 10.0kb upstream 10000   false scaffold0002: 278351-288350 Medicago truncatula
Medtr0002s0780 10.0kb downstream 10.0kb downstream 10936   true scaffold0002: 267415-278350 Medicago truncatula
Medtr0002s0780 10.0kb downstream 10.0kb downstream 10000   false scaffold0002: 267415-277414 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122270078 5265 Fabidae Singleton cluster - no MSA
124039337 5270 Rosid View MSA
123746840 5271 Pentapetalae View MSA
122794950 5272 Eudicot View MSA
122041743 5273 Angiosperm View MSA
123429161 5275 Viridiplantae View MSA
121350825 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain