Gene : Medtr0002s0760 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR32108:SF0 - DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA Description:  DNA-directed RNA polymerase subunit alpha
Genomic Order:  46 Name:  ? Medtr0002s0760
Secondary Identifier:  ? PAC:31084777
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0002s0760 0.5kb upstream 0.5kb upstream 1999   true scaffold0002: 274540-276538 Medicago truncatula
Medtr0002s0760 0.5kb upstream 0.5kb upstream 500   false scaffold0002: 276039-276538 Medicago truncatula
Medtr0002s0760 0.5kb downstream 0.5kb downstream 1999   true scaffold0002: 274040-276038 Medicago truncatula
Medtr0002s0760 0.5kb downstream 0.5kb downstream 500   false scaffold0002: 274040-274539 Medicago truncatula
Medtr0002s0760 1.0kb upstream 1.0kb upstream 2499   true scaffold0002: 274540-277038 Medicago truncatula
Medtr0002s0760 1.0kb upstream 1.0kb upstream 1000   false scaffold0002: 276039-277038 Medicago truncatula
Medtr0002s0760 1.0kb downstream 1.0kb downstream 2499   true scaffold0002: 273540-276038 Medicago truncatula
Medtr0002s0760 1.0kb downstream 1.0kb downstream 1000   false scaffold0002: 273540-274539 Medicago truncatula
Medtr0002s0760 2.0kb upstream 2.0kb upstream 3499   true scaffold0002: 274540-278038 Medicago truncatula
Medtr0002s0760 2.0kb upstream 2.0kb upstream 2000   false scaffold0002: 276039-278038 Medicago truncatula
Medtr0002s0760 2.0kb downstream 2.0kb downstream 3499   true scaffold0002: 272540-276038 Medicago truncatula
Medtr0002s0760 2.0kb downstream 2.0kb downstream 2000   false scaffold0002: 272540-274539 Medicago truncatula
Medtr0002s0760 5.0kb upstream 5.0kb upstream 6499   true scaffold0002: 274540-281038 Medicago truncatula
Medtr0002s0760 5.0kb upstream 5.0kb upstream 5000   false scaffold0002: 276039-281038 Medicago truncatula
Medtr0002s0760 5.0kb downstream 5.0kb downstream 6499   true scaffold0002: 269540-276038 Medicago truncatula
Medtr0002s0760 5.0kb downstream 5.0kb downstream 5000   false scaffold0002: 269540-274539 Medicago truncatula
Medtr0002s0760 10.0kb upstream 10.0kb upstream 11499   true scaffold0002: 274540-286038 Medicago truncatula
Medtr0002s0760 10.0kb upstream 10.0kb upstream 10000   false scaffold0002: 276039-286038 Medicago truncatula
Medtr0002s0760 10.0kb downstream 10.0kb downstream 11499   true scaffold0002: 264540-276038 Medicago truncatula
Medtr0002s0760 10.0kb downstream 10.0kb downstream 10000   false scaffold0002: 264540-274539 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121631485 5273 Angiosperm Singleton cluster - no MSA
122270089 5265 Fabidae Singleton cluster - no MSA
124010813 5270 Rosid Singleton cluster - no MSA
123584737 5271 Pentapetalae Singleton cluster - no MSA
122619438 5272 Eudicot Singleton cluster - no MSA
120903589 5274 Embryophyte Singleton cluster - no MSA
122944244 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain