Gene : Medtr0002s0310 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR22773:SF86 - NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT 2 A, CHLOROPLASTIC-RELATED Description:  NADH-quinone oxidoreductase protein
Genomic Order:  22 Name:  ? Medtr0002s0310
Secondary Identifier:  ? PAC:31084759
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3781 Medicago truncatula pathologic  
Mtruncatula PWY-4302 Medicago truncatula pathologic  
Mtruncatula PWY-5083 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0002s0310 0.5kb upstream 0.5kb upstream 2376   true scaffold0002: 192214-194589 Medicago truncatula
Medtr0002s0310 0.5kb upstream 0.5kb upstream 500   false scaffold0002: 192214-192713 Medicago truncatula
Medtr0002s0310 0.5kb downstream 0.5kb downstream 2376   true scaffold0002: 192714-195089 Medicago truncatula
Medtr0002s0310 0.5kb downstream 0.5kb downstream 500   false scaffold0002: 194590-195089 Medicago truncatula
Medtr0002s0310 1.0kb upstream 1.0kb upstream 2876   true scaffold0002: 191714-194589 Medicago truncatula
Medtr0002s0310 1.0kb upstream 1.0kb upstream 1000   false scaffold0002: 191714-192713 Medicago truncatula
Medtr0002s0310 1.0kb downstream 1.0kb downstream 2876   true scaffold0002: 192714-195589 Medicago truncatula
Medtr0002s0310 1.0kb downstream 1.0kb downstream 1000   false scaffold0002: 194590-195589 Medicago truncatula
Medtr0002s0310 2.0kb upstream 2.0kb upstream 3876   true scaffold0002: 190714-194589 Medicago truncatula
Medtr0002s0310 2.0kb upstream 2.0kb upstream 2000   false scaffold0002: 190714-192713 Medicago truncatula
Medtr0002s0310 2.0kb downstream 2.0kb downstream 3876   true scaffold0002: 192714-196589 Medicago truncatula
Medtr0002s0310 2.0kb downstream 2.0kb downstream 2000   false scaffold0002: 194590-196589 Medicago truncatula
Medtr0002s0310 5.0kb upstream 5.0kb upstream 6876   true scaffold0002: 187714-194589 Medicago truncatula
Medtr0002s0310 5.0kb upstream 5.0kb upstream 5000   false scaffold0002: 187714-192713 Medicago truncatula
Medtr0002s0310 5.0kb downstream 5.0kb downstream 6876   true scaffold0002: 192714-199589 Medicago truncatula
Medtr0002s0310 5.0kb downstream 5.0kb downstream 5000   false scaffold0002: 194590-199589 Medicago truncatula
Medtr0002s0310 10.0kb upstream 10.0kb upstream 11876   true scaffold0002: 182714-194589 Medicago truncatula
Medtr0002s0310 10.0kb upstream 10.0kb upstream 10000   false scaffold0002: 182714-192713 Medicago truncatula
Medtr0002s0310 10.0kb downstream 10.0kb downstream 11876   true scaffold0002: 192714-204589 Medicago truncatula
Medtr0002s0310 10.0kb downstream 10.0kb downstream 10000   false scaffold0002: 194590-204589 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122288516 5265 Fabidae View MSA
124072992 5270 Rosid View MSA
123753255 5271 Pentapetalae View MSA
122797410 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain