Gene : Medtr0002s0280 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11652//PTHR11652:SF17 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER Description:  S12-like, 30S ribosomal protein S12 subfamily protein
Genomic Order:  20 Name:  ? Medtr0002s0280
Secondary Identifier:  ? PAC:31084750
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0002s0280 0.5kb upstream 0.5kb upstream 2760   true scaffold0002: 188207-190966 Medicago truncatula
Medtr0002s0280 0.5kb upstream 0.5kb upstream 500   false scaffold0002: 188207-188706 Medicago truncatula
Medtr0002s0280 0.5kb downstream 0.5kb downstream 2760   true scaffold0002: 188707-191466 Medicago truncatula
Medtr0002s0280 0.5kb downstream 0.5kb downstream 500   false scaffold0002: 190967-191466 Medicago truncatula
Medtr0002s0280 1.0kb upstream 1.0kb upstream 3260   true scaffold0002: 187707-190966 Medicago truncatula
Medtr0002s0280 1.0kb upstream 1.0kb upstream 1000   false scaffold0002: 187707-188706 Medicago truncatula
Medtr0002s0280 1.0kb downstream 1.0kb downstream 3260   true scaffold0002: 188707-191966 Medicago truncatula
Medtr0002s0280 1.0kb downstream 1.0kb downstream 1000   false scaffold0002: 190967-191966 Medicago truncatula
Medtr0002s0280 2.0kb upstream 2.0kb upstream 4260   true scaffold0002: 186707-190966 Medicago truncatula
Medtr0002s0280 2.0kb upstream 2.0kb upstream 2000   false scaffold0002: 186707-188706 Medicago truncatula
Medtr0002s0280 2.0kb downstream 2.0kb downstream 4260   true scaffold0002: 188707-192966 Medicago truncatula
Medtr0002s0280 2.0kb downstream 2.0kb downstream 2000   false scaffold0002: 190967-192966 Medicago truncatula
Medtr0002s0280 5.0kb upstream 5.0kb upstream 7260   true scaffold0002: 183707-190966 Medicago truncatula
Medtr0002s0280 5.0kb upstream 5.0kb upstream 5000   false scaffold0002: 183707-188706 Medicago truncatula
Medtr0002s0280 5.0kb downstream 5.0kb downstream 7260   true scaffold0002: 188707-195966 Medicago truncatula
Medtr0002s0280 5.0kb downstream 5.0kb downstream 5000   false scaffold0002: 190967-195966 Medicago truncatula
Medtr0002s0280 10.0kb upstream 10.0kb upstream 12260   true scaffold0002: 178707-190966 Medicago truncatula
Medtr0002s0280 10.0kb upstream 10.0kb upstream 10000   false scaffold0002: 178707-188706 Medicago truncatula
Medtr0002s0280 10.0kb downstream 10.0kb downstream 12260   true scaffold0002: 188707-200966 Medicago truncatula
Medtr0002s0280 10.0kb downstream 10.0kb downstream 10000   false scaffold0002: 190967-200966 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122270072 5265 Fabidae Singleton cluster - no MSA
124063732 5270 Rosid View MSA
123750891 5271 Pentapetalae View MSA
122796702 5272 Eudicot View MSA
122044358 5273 Angiosperm View MSA
123429171 5275 Viridiplantae View MSA
121351184 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain