Gene : Medtr0002s0200 M. truncatula Mt4.0v1
Defline:  (1 of 9) 2.7.4.1 - Polyphosphate kinase / Polyphosphoric acid kinase Description:  NADH-plastoquinone oxidoreductase subunit 5
Genomic Order:  15 Name:  ? Medtr0002s0200
Secondary Identifier:  ? PAC:31084744
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0002s0200 0.5kb upstream 0.5kb upstream 2481   true scaffold0002: 175868-178348 Medicago truncatula
Medtr0002s0200 0.5kb upstream 0.5kb upstream 500   false scaffold0002: 175868-176367 Medicago truncatula
Medtr0002s0200 0.5kb downstream 0.5kb downstream 2481   true scaffold0002: 176368-178848 Medicago truncatula
Medtr0002s0200 0.5kb downstream 0.5kb downstream 500   false scaffold0002: 178349-178848 Medicago truncatula
Medtr0002s0200 1.0kb upstream 1.0kb upstream 2981   true scaffold0002: 175368-178348 Medicago truncatula
Medtr0002s0200 1.0kb upstream 1.0kb upstream 1000   false scaffold0002: 175368-176367 Medicago truncatula
Medtr0002s0200 1.0kb downstream 1.0kb downstream 2981   true scaffold0002: 176368-179348 Medicago truncatula
Medtr0002s0200 1.0kb downstream 1.0kb downstream 1000   false scaffold0002: 178349-179348 Medicago truncatula
Medtr0002s0200 2.0kb upstream 2.0kb upstream 3981   true scaffold0002: 174368-178348 Medicago truncatula
Medtr0002s0200 2.0kb upstream 2.0kb upstream 2000   false scaffold0002: 174368-176367 Medicago truncatula
Medtr0002s0200 2.0kb downstream 2.0kb downstream 3981   true scaffold0002: 176368-180348 Medicago truncatula
Medtr0002s0200 2.0kb downstream 2.0kb downstream 2000   false scaffold0002: 178349-180348 Medicago truncatula
Medtr0002s0200 5.0kb upstream 5.0kb upstream 6981   true scaffold0002: 171368-178348 Medicago truncatula
Medtr0002s0200 5.0kb upstream 5.0kb upstream 5000   false scaffold0002: 171368-176367 Medicago truncatula
Medtr0002s0200 5.0kb downstream 5.0kb downstream 6981   true scaffold0002: 176368-183348 Medicago truncatula
Medtr0002s0200 5.0kb downstream 5.0kb downstream 5000   false scaffold0002: 178349-183348 Medicago truncatula
Medtr0002s0200 10.0kb upstream 10.0kb upstream 11981   true scaffold0002: 166368-178348 Medicago truncatula
Medtr0002s0200 10.0kb upstream 10.0kb upstream 10000   false scaffold0002: 166368-176367 Medicago truncatula
Medtr0002s0200 10.0kb downstream 10.0kb downstream 11981   true scaffold0002: 176368-188348 Medicago truncatula
Medtr0002s0200 10.0kb downstream 10.0kb downstream 10000   false scaffold0002: 178349-188348 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122270071 5265 Fabidae Singleton cluster - no MSA
124010800 5270 Rosid Singleton cluster - no MSA
123753255 5271 Pentapetalae View MSA
122797410 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain